Gene SeHA_C4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4610 
SymbolsoxR 
ID6489783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4500336 
End bp4500794 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content55% 
IMG OID642744680 
Productredox-sensitive transcriptional activator SoxR 
Protein accessionYP_002048257 
Protein GI194451879 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR01950] redox-sensitive transcriptional activator SoxR 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.327282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA AATCTCCCCG TTTAAAAGCC TTACTGACGC CGGGGGAAGT TGCGAAACGT 
AGCGGTGTTG CTGTGTCCGC CCTGCACTTC TATGAAAGCA AAGGGCTAAT TACCAGTATC
CGTAATAGCG GTAACCAACG GCGATACAAG CGTGACGTGT TGCGTTATGT CGCGATTATC
AAGATCGCCC AGCGTATCGG CATCCCGCTG GCAACTATCG GCGACGCGTT TGGTATCTTG
CCGGAAGGAC ATACGTTAAG CGCGAAAGAG TGGAAGCAGC TCTCCTCGCA GTGGCGCGAA
GAGTTAGACC GACGTATTCA TACGCTGGTG GCGTTGCGCG ATGAGCTGGA CGGTTGTATC
GGCTGCGGCT GTTTATCGCG TAGCGACTGT CCGCTGCGAA ATCCAGGCGA CAGGCTCGGC
GAACACGGGA CGGGTGCCCG GCTGCTTGAA GATGATTAA
 
Protein sequence
MEKKSPRLKA LLTPGEVAKR SGVAVSALHF YESKGLITSI RNSGNQRRYK RDVLRYVAII 
KIAQRIGIPL ATIGDAFGIL PEGHTLSAKE WKQLSSQWRE ELDRRIHTLV ALRDELDGCI
GCGCLSRSDC PLRNPGDRLG EHGTGARLLE DD