Gene SeHA_C4609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4609 
Symbol 
ID6491985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4499926 
End bp4500249 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content52% 
IMG OID642744679 
ProductDNA-binding transcriptional regulator SoxS 
Protein accessionYP_002048256 
Protein GI194448506 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.917171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.375209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATC AGCAGATAAT TCAGACCCTT ATCGAATGGA TTGATGAACA TATCGACCAA 
CCGCTAAACA TTGATGTGGT GGCAAAAAAA TCGGGCTACT CCAAGTGGTA TTTGCAGCGG
ATGTTTCGTA CGGTAACGCA TCAAACATTA GGCGAGTATA TTCGCCAGCG CCGTCTCCTG
TTGGCGGCCG TTGAGCTACG AACGACCGAG CGCCCGATTT TTGATATCGC GATGGACCTG
GGCTATGTAT CGCAGCAAAC CTTCTCGCGT GTATTCCGCC GCGAGTTCGA TCGCACTCCC
AGCGATTACC GTCACCGCCT GTAG
 
Protein sequence
MSHQQIIQTL IEWIDEHIDQ PLNIDVVAKK SGYSKWYLQR MFRTVTHQTL GEYIRQRRLL 
LAAVELRTTE RPIFDIAMDL GYVSQQTFSR VFRREFDRTP SDYRHRL