Gene SeHA_C4608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4608 
Symbol 
ID6487837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4498337 
End bp4499938 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content48% 
IMG OID642744678 
Productcyclic diguanylate phosphodiesterase (EAL) domain-containing protein 
Protein accessionYP_002048255 
Protein GI194449156 
COG category[T] Signal transduction mechanisms 
COG ID[COG4943] Predicted signal transduction protein containing sensor and EAL domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.342789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA GCACACGACG CAAGGTGTTG AGATTTCTCG GAACGATCAT TGTGGTGTTA 
CTTCCTGTAT TGCTGGCGAT CTGGTTTGCT CATATCCGGG CAGTCTCTGA AACCAGAAAT
CAGTTACATT CATTTGCGCA GTTGGTATTA GATAAAACGG AGCGGGTTAT CCTGCAAGCA
GATTTAGCCC GCGATGCCGC TGAACAATAT CAGGGGCAAG CCTGTACGCC AGCCCATCAA
CAGCGAATGC TGAATATTAT CCGCGGTCGT TTGTACATTA ATGAGTTGAT TTATGCTAAG
GGCCAGCGTT TTCTATGCTC TACGGTTATG ACGCCAACAA GTTCTTATTT TATTCCCCGC
GCTGACTATA AACGAAAGCC TGACATCGCT ATTTATTACT ATCGTGATAC GCCTTTTTTC
AACGGTTATA AAATGACATA TATGCAGCGG GGAAACTATG TCGCGGTTAT CAATCCCTTA
TCTTATAGCG AGGTGATGTC AGACGATCCG GCGTTGGCCT GGGGAATGTA TGATACGGTG
ACCAACACCT TTTTCTCCCT GAGTGAACAG GCGCAGGCTG ATCAGCTATT ACCTTTGGTA
CGACGGAGTG AACCTGTGTT CCAACAGGGT GAGCGTTTTT ATACTCTGGT TAAATCAGCA
AAACGACCGG TTGCCGCGAT TGTGTCAACC TCAAAGCAAC GCTTTTACCA GAACCTCTTT
CATCAGCTTA CGTTAACGCT ACCGTTAGGG ATCATCTGTA GCATTGTCGT CTTATTTATG
TGGTCACGAT CCCGGCAGGC ATATTACTCA CCGCGTCGAT TGCTGCAACG GGCCATTACC
AGGCACCAGC TTTGCCTTCA TTATCAGCCG ATCATTGATA TCCGAAACGG GACATGTGTA
GGTGCCGAAG CGCTATTGCG TTGGCCGGGC TATCACGGTC CGGTGATGAG CCCGTGCGAA
TTTATTCCGC TGGCGGAAAA AGAGGGGATG ATTGAGCAGA TCACCGATTA TGTCGTCGAA
GAGGTATTTA ATGATTTAGG TGGTTTTCTG GCCGCGCACC CGCATCTTTA TGTCTCTATC
AATCTCTCTG CCGCCGATTT TCTCTCTTCC CGACTAATTG TGATGATTCA TGAAAAAACG
CGTCAGCATT CAGTGCTTGC GCAACAGATA AAGGTTGAAG TGACCGAGCG CGGATTTATT
GATGTGCCTA AAATGACGCC GATTATTCAG GCGTTTCGCC AGGCGGGATA CGAGGTGGCA
ATTGATGACT TTGGTACCGG CTATTCGAAC TTGCATAACC TGTACTCATT AAATGTCGAC
CTTTTAAAAA TTGATAAATC TTTTGTCGAC ACGCTAACCA CTAATAGCGC CAGCCATTTG
ATTGTGGAAC ATATTATTGA AATGGCGCAA AGTTTGCGGC TAAAAATCAT TGCGGAGGGG
GTTGAAACGG CTGAACAGGT TAGCTGGTTG CTAAAACGCG GCGTTCAGTA TTGTCAGGGA
TGGCACTTTG CGAAGGCGTT GCCACCGCAG GAATTCATCG CCTGGCTACA ACAAACGCCC
GCGCCTCTGA CGATACGCGG GCAGACGCCC TACAGGCGGT GA
 
Protein sequence
MSQSTRRKVL RFLGTIIVVL LPVLLAIWFA HIRAVSETRN QLHSFAQLVL DKTERVILQA 
DLARDAAEQY QGQACTPAHQ QRMLNIIRGR LYINELIYAK GQRFLCSTVM TPTSSYFIPR
ADYKRKPDIA IYYYRDTPFF NGYKMTYMQR GNYVAVINPL SYSEVMSDDP ALAWGMYDTV
TNTFFSLSEQ AQADQLLPLV RRSEPVFQQG ERFYTLVKSA KRPVAAIVST SKQRFYQNLF
HQLTLTLPLG IICSIVVLFM WSRSRQAYYS PRRLLQRAIT RHQLCLHYQP IIDIRNGTCV
GAEALLRWPG YHGPVMSPCE FIPLAEKEGM IEQITDYVVE EVFNDLGGFL AAHPHLYVSI
NLSAADFLSS RLIVMIHEKT RQHSVLAQQI KVEVTERGFI DVPKMTPIIQ AFRQAGYEVA
IDDFGTGYSN LHNLYSLNVD LLKIDKSFVD TLTTNSASHL IVEHIIEMAQ SLRLKIIAEG
VETAEQVSWL LKRGVQYCQG WHFAKALPPQ EFIAWLQQTP APLTIRGQTP YRR