Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4573 |
Symbol | lamB |
ID | 6491376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 4448029 |
End bp | 4449387 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642744645 |
Product | maltoporin |
Protein accession | YP_002048222 |
Protein GI | 194450445 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.254819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATTA CTCTGCGCAA ACTCCCACTG GCGGTTGCTG TCGCAGCGGG CGTAATGTCC GCTCAGGCAA TGGCTGTCGA TTTCCACGGT TACGCCCGTT CCGGTATTGG CTGGACGGGA AGCGGCGGCG AACAACAATG TTTCCAGGTG ACCGGTGCAC AAAGTAAATA CCGTCTCGGT AACGAATGTG AAACCTATGC GGAACTGAAA CTGGGCCAGG AAGTGTGGAA AGAGGGCGAT AAGAGCTTCT ATTTCGACAC CAACGTCGCC TATTCGGTTA ACCAGCAGAA CGACTGGGAA TCGACCGATC CCGCCTTCCG CGAAGCGAAC GTGCAGGGTA AAAACCTGAT TGAATGGCTG CCGGGCTCTA CCATCTGGGC CGGTAAGCGC TTCTATCAGC GTCATGACGT ACACATGATC GACTTCTACT ACTGGGATAT TTCAGGTCCT GGCGCAGGTA TCGAAAATAT CGATCTGGGC TTCGGTAAGC TTTCACTGGC GGCGACCCGG TCTACTGAAG CGGGCGGCTC TTACACCTTC AGCAGCCAGA ATATTTATGA TGAAGTGAAA GATACCGCTA ACGACGTCTT TGACGTACGT CTGGCTGGTC TGCAAACGAA CCCGGACGGC GTACTGGAGC TGGGCGTTGA TTACGGCCGC GCCAATACGA CCGATGGTTA TAAGCTGGCT GATGGGGCAT CGAAAGACGG CTGGATGTTC ACCGCCGAAC ACACGCAAAG CATGTTGAAA GGCTATAACA AGTTTGTCGT GCAATATGCC ACCGATGCCA TGACCACGCA GGGTAAAGGC CAGGCGCGCG GTTCCGACGG TTCTTCATCT TTCACTGAAG AATTGCCTGA TGGAACCAAA ATTAATTACG CCAATAAGGT TATCAATAAT AATGGCAATA TGTGGCGTAT TTTGGATCAT GGCGCCATCT CGCTTGGTGA TAAATGGGAT TTGATGTACG TCGGTATGTA CCAGAATATC GATTGGGATA ATAACCTGGG TACTGAGTGG TGGACCGTGG GTGTACGTCC AATGTACAAG TGGACGCCAA TCATGAGCAC CCTGCTGGAA GTCGGCTACG ACAACGTGAA ATCTCAGCAG ACCGGCGATC GTAACAATCA ATATAAAATC ACCCTGGCGC AACAGTGGCA GGCGGGCGAC AGCATCTGGT CGCGTCCGGC TATCCGTATT TTCGCCACCT ACGCGAAATG GGATGAGAAA TGGGGCTATA TCAAAGACGG CGATAACATT TCCCGTTATG CCGCAGCGAC TAACTCCGGC ATTTCCACCA ACAGCCGTGG CGATAGCGAT GAGTGGACCT TCGGCGCCCA GATGGAAATC TGGTGGTAA
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Protein sequence | MMITLRKLPL AVAVAAGVMS AQAMAVDFHG YARSGIGWTG SGGEQQCFQV TGAQSKYRLG NECETYAELK LGQEVWKEGD KSFYFDTNVA YSVNQQNDWE STDPAFREAN VQGKNLIEWL PGSTIWAGKR FYQRHDVHMI DFYYWDISGP GAGIENIDLG FGKLSLAATR STEAGGSYTF SSQNIYDEVK DTANDVFDVR LAGLQTNPDG VLELGVDYGR ANTTDGYKLA DGASKDGWMF TAEHTQSMLK GYNKFVVQYA TDAMTTQGKG QARGSDGSSS FTEELPDGTK INYANKVINN NGNMWRILDH GAISLGDKWD LMYVGMYQNI DWDNNLGTEW WTVGVRPMYK WTPIMSTLLE VGYDNVKSQQ TGDRNNQYKI TLAQQWQAGD SIWSRPAIRI FATYAKWDEK WGYIKDGDNI SRYAAATNSG ISTNSRGDSD EWTFGAQMEI WW
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