Gene SeHA_C4521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4521 
Symbol 
ID6489925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp4402595 
End bp4403419 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content58% 
IMG OID642744594 
Producttranscriptional repressor IclR 
Protein accessionYP_002048171 
Protein GI194450694 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.693212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.182303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCCC CTGTTCCCGC GAAACGCGGG AGAAAACCTG CCGCTACCAC TGCACCCGTA 
ACCGGGCAGG TTCAGTCATT AACTCGCGGT CTGAAGCTGC TGGAGTGGAT TGCCGAGTCC 
AACGGCAGCG TCGCGCTGAC CGAACTGGCG CAACAGGCGG GTTTGCCTAA TTCCACGACT 
CACCGTCTAC TCACCACCAT GCAGCAGCAG GGTTTTGTCC GCCAGGTTGG TGAGCTGGGC 
CATTGGGCCG TAGGCGCACA CGCGTTTATC GTCGGTAGCA GCTTCTTACA GAGCCGTAAT 
CTGCTGGCGA TTGTCCATCC GATTTTGCGC AAGCTGATGG AGGACTCCGG CGAAACGGTA 
AACCTTGCCG TACTCGACCA GAGCGACCAT CAGGCTATTA TTATCGACCA GGTGCAGTGC 
ACACAATTGA TGCGCATGTC CGCCCCTATT GGCGGCAAGC TGCCCATGCA CGCCTCTGGC 
GCGGGCAAGG CGTTTTTATC ACAGCTCAGT GAGGAACAGG TTACCAGTCT GCTGCACCGC 
AAGGGGTTGC ACGCTTATAC CCATGCGACG CTGGTGTCGC CGCTGCATCT GAAAGATGAC 
CTCGCCCAAA CACGCAAGCG CGGCTATTCC TTTGACGACG AAGAACATGC GCTCGGTCTG 
CGCTGCGTGG CCTCGTGTAT TTATGACGAA CACCGCGAAC CGTTTGCGGC CCTCTCTATT 
TCCGGCCCCT GCTCACGCAT TACCGACGAT CGCGTCACCG AACTTGGCGC CATGGTGATT 
AAAGCGGCGA AAGAGGTAAC GCTGGCCTAT GGTGGAACTC GCTGA
 
Protein sequence
MVAPVPAKRG RKPAATTAPV TGQVQSLTRG LKLLEWIAES NGSVALTELA QQAGLPNSTT 
HRLLTTMQQQ GFVRQVGELG HWAVGAHAFI VGSSFLQSRN LLAIVHPILR KLMEDSGETV 
NLAVLDQSDH QAIIIDQVQC TQLMRMSAPI GGKLPMHASG AGKAFLSQLS EEQVTSLLHR 
KGLHAYTHAT LVSPLHLKDD LAQTRKRGYS FDDEEHALGL RCVASCIYDE HREPFAALSI 
SGPCSRITDD RVTELGAMVI KAAKEVTLAY GGTR