| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4468 |
|---|
| Symbol | |
|---|
| ID | 6490979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 4354417 |
|---|
| End bp | 4355379 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642744546 |
|---|
| Product | biotin--protein ligase |
|---|
| Protein accession | YP_002048130 |
|---|
| Protein GI | 194449709 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0221784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.00169649 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATA CTACCGTTCC CCTGACGCTG ATCTCACTAC TTGCCGACGG AGAGTTTCAC
TCAGGCGAGC AGTTGGGTGA ACGGCTGGGA ATGAGCCGCG CGGCTATTAA TAAACATATC
CAGACATTAC GCGACTGGGG AGTAGATGTA TTTACCGTTC CCGGGAAAGG ATATAGCTTA
CCGGAACCCA TCCAGTTACT GGATGCTGAC CGTATACATA GCCAACTGGA TAGCGGAAAC
GTGGCGGTAT TGCCCGTTAT CGATTCAACC AATCAGTATT TACTTGATCG AATTGGCGAG
CTGCGTTCAG GCGATGCCTG TGTAGCAGAA TACCAACAGG CGGGGCGTGG TCGTCGCGGG
CGTAAATGGT TCTCACCGTT TGGTGCGAAT CTATATCTTT CAATGTACTG GCGTCTGGAG
CAGGGGCCTG CGGCGGCAAT AGGCTTGAGT CTGGTCATTG GAATTGTGAT GGCGGAAGTG
CTGCGTGAAC TGGGCGCAGA TAAAGTTCGT GTGAAGTGGC CTAACGACCT CTACCTGCTG
GATCGCAAAC TGGCGGGTAT TCTGGTCGAG TTAACCGGTA AAACGGGCGA TGCCGCACAA
ATAGTGATTG GCGCTGGTAT TAACATGGCA ATGCGTCGCG TAGAAGAGGA CGTGATAAAT
CAGGGATGGA TCACACTACA AGAGGCCGGA ATTACGCTTG ACCGCAATAT GCTGGCCGCA
AAGCTGATTT ATAAGCTACG TGCTGCGCTT GAGCTTTTTG AGCAAGAAGG TCTTTCTCCT
TATCTTTCGC GCTGGAAAAA ACTGGATAAT TTTATTGATC GCCCGGTAAA ACTAATTATT
GGCGACAAAG AAATATTTGG TATTTCTCGC GGCATTGATA CTCAGGGTGC ATTATTGCTT
GAACAGGATG GCGTGATTAA ACCCTGGATG GGTGGGGAAA TATCGCTGCG AAGCGCCGAA
TAG
|
|---|
| Protein sequence | MKDTTVPLTL ISLLADGEFH SGEQLGERLG MSRAAINKHI QTLRDWGVDV FTVPGKGYSL
PEPIQLLDAD RIHSQLDSGN VAVLPVIDST NQYLLDRIGE LRSGDACVAE YQQAGRGRRG
RKWFSPFGAN LYLSMYWRLE QGPAAAIGLS LVIGIVMAEV LRELGADKVR VKWPNDLYLL
DRKLAGILVE LTGKTGDAAQ IVIGAGINMA MRRVEEDVIN QGWITLQEAG ITLDRNMLAA
KLIYKLRAAL ELFEQEGLSP YLSRWKKLDN FIDRPVKLII GDKEIFGISR GIDTQGALLL
EQDGVIKPWM GGEISLRSAE
|
|---|
| |