Gene SeHA_C4418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4418 
SymbolglpF 
ID6488006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4300252 
End bp4301097 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content53% 
IMG OID642744500 
Productglycerol uptake facilitator protein 
Protein accessionYP_002048089 
Protein GI194450557 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA CATCAACCTT AAAAGGCCAG TGCATTGCTG AATTCCTCGG TACCGGGTTG 
TTGATTTTTT TCGGTGTGGG TTGTGTCGCT GCGCTTAAAG TTGCCGGAGC TACTTTTGGA
CAGTGGGAAA TCAGCGTCAT CTGGGGTCTG GGGGTAGCGA TGGCTATCTA CCTGACGGCA
GGTGTTTCTG GCGCACACCT GAACCCGGCA GTGACCATCG CACTCTGGCT ATTTGCCTGT
TTCGACAAAC GTAAAGTTGT TCCTTTTATT ATTTCTCAAG TTGCCGGCGC CTTTTGCGCA
GCGGCGTTAG TTTACGGGCT TTATTACAAT CTTTTTGTGG ACTTCGAACA AACCCACCAT
ATCGTCCGTG GCAGCGTTGA AAGTCTCAAT CTCGCAGGCA TTTTCTCAAC TTACCCGAAT
CCTCATATCA ATTTTGTGCA GGCCTTCGCG GTTGAAATGG TGATTACCGC TATTCTGATG
GGGCTGATTC TGGCGCTGAC CGACGACGGA AACGGCGTAC CTCGCGGTCC GCTTGCGCCA
CTGCTCATTG GTTTACTGAT CGCCGTTATC GGTGCCTCTA TGGGGCCGTT GACCGGGTTT
GCGATGAATC CGGCGCGTGA CTTTGGCCCC AAAATGTTCG CCGGGCTTGC CGGCTGGGGT
GAAATTGCGT TTACCGGCGG TAGAGACATT CCTTACTTCC TGGTGCCGCT GTTTGGCCCC
ATCGTCGGCG CCATTCTGGG CGCGTTTGCT TATCGCAAAT TTATTGGCCG TCATTTGCCG
TGCGATACCT GCGTCGTGGA AGAGAAGGAC TCCACCGCGA CCACACAACA AAATGCTTCG
CTGTAA
 
Protein sequence
MSQTSTLKGQ CIAEFLGTGL LIFFGVGCVA ALKVAGATFG QWEISVIWGL GVAMAIYLTA 
GVSGAHLNPA VTIALWLFAC FDKRKVVPFI ISQVAGAFCA AALVYGLYYN LFVDFEQTHH
IVRGSVESLN LAGIFSTYPN PHINFVQAFA VEMVITAILM GLILALTDDG NGVPRGPLAP
LLIGLLIAVI GASMGPLTGF AMNPARDFGP KMFAGLAGWG EIAFTGGRDI PYFLVPLFGP
IVGAILGAFA YRKFIGRHLP CDTCVVEEKD STATTQQNAS L