| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4403 |
|---|
| Symbol | |
|---|
| ID | 6491313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 4284988 |
|---|
| End bp | 4286538 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642744485 |
|---|
| Product | autoinducer-2 (AI-2) kinase |
|---|
| Protein accession | YP_002048074 |
|---|
| Protein GI | 194451854 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00650936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 106 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTG ACGCCGGTAC CGGTAGCGTC AGAGCAGTAA TTTTTGATCT ACAAGGAAAG
CAAATAGCTG TCGGTCAAGC GGAATGGCAG CATCTGGCCG TGCCGGATGT GCCTGGTTCG
ATGGAGTTTG ATCTTGCCAA AAACTGGCAA CTGGCTTGCC AGTGTATCCG TCAGGCACTA
CAGAAAGCCG CCATCCCTGC AACGGCTATC GCTGCCGTAT CGGCCTGCTC GATGCGTGAA
GGCATTGTTA TTTATGACAG TAACGGCGAA CCAATTTGGG CCTGCGCTAA TGTTGACGCC
CGCGCGGCGC ACGAAGTCAG TGAATTAAAA GAGCTGCACG ATAACACCTT TGAGGAGGAA
GTTTATCGTT GCTCCGGGCA AACGCTGGCG CTCAGCGCTA TTCCGCGTCT GCTCTGGCTT
GCCCACCATC GTCCGGATAT TTATCATCGC GCGTCAACCG TCACTATGAT CAGCGACTGG
ATGGCCTTTA TGCTCAGCGG CGAACTGGCG GTCGATCCCT CCAACGCAGG CACGACGGGG
TTATTGGATC TGGTGACCCG CAACTGGAAA CGTAGTCTGT TACAGATGGC GGGCCTGCGT
TCTGACATTC TCTCGCCGGT AAAAGAAACC GGGACGCTGC TCGGTCACAT TTCACAGAAA
GCGGCTGAAC AGTGCGACCT GCAAGCGGGT ACGCCGGTCA TCGTTGGCGG CGGCGATGTG
CAGTTAGGCT GTCTGGGGCT GGGCGTCGTA CGCCCGGCGC AAACGGCCGT GCTGGGCGGA
ACCTTCTGGC AACAGGTCGT CAATCTTCCC GCGCCGGTCA CCGACCCAAA CATGAACGTT
CGCATCAATC CTCATGTGAT CCCCGGTATG GTACAAACCG AGTCTATTAG CTTTTTTACT
GGGTTAACGA TGCGTTGGTT CCGCGACGCC TTTTGCGCCG AGGAAAAACT AATCGCTGAA
AGGTTAGGTA TTGATGCGTA TTCCCTGCTG GAAGATATGG CCAGCCGGGT GCCTCCCGGC
GCGTACGGTG TGATGCCCAT CTTCTCTGAC GTTATGCGTT TTAAACGCTG GTACCATGCC
GCGCCGTCGT TTATCAATCT GTCTATCGAT CCTGAAAAGT GTAATAAAGC GACCCTATTT
CGCGCGCTGG AAGAGAATGC CGCCATTGTT TCCGCCTGCA ATTTACAGCA AATTGCCGCG
TTTTCCGGCG TACAGGCCGA CTCGCTGGTT TTTGCTGGCG GAGGATCTAA AGGCAAATTA
TGGAGCCAAA TCCTTGCCGA CGTTACGGGA CTCACCGTTC ACGTACCTGT CGTCAAAGAA
GCTACCGCGC TAGGGTGCGC TATTGCCGCA GGCGTTGGCG TGGGTGTCTG GCCATCGCTG
GCGGAAACGG GAGAAAAGCT AGTGCGCTGG GATCGGGAGC ATAAACCTAA TCCTGAAAAT
TTCGCTGTCT ATCAGCAGGC CAGAGAAAAA TGGCAGGCCG TTTATCAGGA TCAACGCGCG
CTGGTCGATG GTGGCTTAAC GACATCCCTC TGGAAAGCGC CAGGCCTGTA A
|
|---|
| Protein sequence | MALDAGTGSV RAVIFDLQGK QIAVGQAEWQ HLAVPDVPGS MEFDLAKNWQ LACQCIRQAL
QKAAIPATAI AAVSACSMRE GIVIYDSNGE PIWACANVDA RAAHEVSELK ELHDNTFEEE
VYRCSGQTLA LSAIPRLLWL AHHRPDIYHR ASTVTMISDW MAFMLSGELA VDPSNAGTTG
LLDLVTRNWK RSLLQMAGLR SDILSPVKET GTLLGHISQK AAEQCDLQAG TPVIVGGGDV
QLGCLGLGVV RPAQTAVLGG TFWQQVVNLP APVTDPNMNV RINPHVIPGM VQTESISFFT
GLTMRWFRDA FCAEEKLIAE RLGIDAYSLL EDMASRVPPG AYGVMPIFSD VMRFKRWYHA
APSFINLSID PEKCNKATLF RALEENAAIV SACNLQQIAA FSGVQADSLV FAGGGSKGKL
WSQILADVTG LTVHVPVVKE ATALGCAIAA GVGVGVWPSL AETGEKLVRW DREHKPNPEN
FAVYQQAREK WQAVYQDQRA LVDGGLTTSL WKAPGL
|
|---|
| |