Gene SeHA_C4377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4377 
Symbol 
ID6491887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4263123 
End bp4263959 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content54% 
IMG OID642744461 
Producttranscriptional activator RhaS 
Protein accessionYP_002048050 
Protein GI194448585 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAC TGCATAGCGT GGATTTTTTT CCATCAGGTA AAGCGCCCGT AGCGATTGAA 
CCTCGTCTGC CGCAAGCCGC TTTCCCTGAA CACCATCATG ACTTCCATGA AATCGTGATT
GTGGAACACG GTACGGGCAT TCATGTATTC AACGGGCAGC CGTATACCAT CAGCGGCGGT
ACCGTGTGTT TTGTTCGCGA TCACGACCGG CATTTATATG AACATACCGA CAACCTATGC
CTGACGAATG TACTGTGGCG TTCACCGGAC GCCTTCCAGT TCCTGGCGGG GTTGGATCAA
TTGCTGCCGC AGGAGCAGGA TGGTTACTAT CCTTCGCACT GGCGGGTGAA TCAGAGTGTG
TTGCAGCAGG TGCGCCAGTT GGTCGGTCTG ATGGAGCGCA CCGGAGACGG CATGGATGCG
CCTGCCGTGG CGAATCGCGA AATTTTGTTT ATGCAACTAC TGGTGTTGTT ACGCCGCAGT
AGCCTGATGG AAGGCGCGAC CAATAACGAC GCCAAACTCA ACCAACTGAT GGCATGGCTG
GAAGACCATT TTGCGGAGGA GGTCTGCTGG GAGGCGGTAG CTGAACAGTT TTCGCTGTCG
CTACGCACGC TGCATCGTCA GCTTAAACAG CATACCGGGC TGACGCCGCA ACGTTACCTT
AATCGCCTGC GTTTGATCAA AGCCCGGCAT TTATTGCGCC ATAGCGATCA TAGCGTGACA
GAAATCGCGT ACCGCTGCGG TTTTGGCGAC AGTAACCACT TTTCGACTCT GTTTCGCCGA
GAATTTAACT GGTCGCCGCG GGATATCCGT CAGGGACGCG ATGCGATAAT CCAGTAA
 
Protein sequence
MTVLHSVDFF PSGKAPVAIE PRLPQAAFPE HHHDFHEIVI VEHGTGIHVF NGQPYTISGG 
TVCFVRDHDR HLYEHTDNLC LTNVLWRSPD AFQFLAGLDQ LLPQEQDGYY PSHWRVNQSV
LQQVRQLVGL MERTGDGMDA PAVANREILF MQLLVLLRRS SLMEGATNND AKLNQLMAWL
EDHFAEEVCW EAVAEQFSLS LRTLHRQLKQ HTGLTPQRYL NRLRLIKARH LLRHSDHSVT
EIAYRCGFGD SNHFSTLFRR EFNWSPRDIR QGRDAIIQ