Gene SeHA_C4376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4376 
SymbolrhaB 
ID6488785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4261366 
End bp4262835 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content55% 
IMG OID642744460 
Productrhamnulokinase 
Protein accessionYP_002048049 
Protein GI194449594 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID[TIGR02627] rhamnulokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTC GCCATTGTGT CGCGGTTGAT CTCGGCGCAT CCAGCGGGCG CGTGATGCTG 
GCGCGTTACG ACAGCAAACA CCGTACCCTG ACGCTACGTG AAATTCACCG TTTTGTGAAC
TGCCTACAAA AAACAGACGG GTTTGACACC TGGGACATCG ACAGTCTGGA AAAGGATATC
CGTCTTGGTC TGAAGAAAGT CTGCAATGAA GGCATTCTTA TCGACAGCAT CGGCATCGAC
ACCTGGGGCG TCGATTATGT CCTGCTGGAT AAACAAGGTC AGCGTGTCGG CCTGCCGGTC
TCCTACCGCG ATAACCGTAC CACGGGCATC ATGCCGCAAG CGCTGGTCCA GATCGGCAAA
AGCGAAATCT ATCGCCGCAG CGGGATTCAG TTTCTGCCGT TTAACACCAT CTATCAGCTA
CGCGCGCTGA CGAAACAACA GCCTGAGTTA ACAGCGCAGG TCGCTCATGC GCTGCTGATG
CCCGATTATT TCAGTTACCG CCTGACCGGT GAAATGAACT GGGAATACAC CAACGCCACG
ACCACCCAGT TGGTCAATAT CAATACCGAT GACTGGGACG ATACCCTGCT GGCGTGGACT
GGCGCGAAAA AGAGCTGGTT CGGTCGCCCC TCGCACCCTG GCAATGTTAT CGGCGACTGG
ATTTGCCCGC AGGGCAACCG TATTCCGGTG GTAGCCGTCG CCAGCCACGA TACCGCCAGC
GCCGTTATTG CCTCTCCGCT GGCAAATAAA CATAGCGCTT ACCTGTCTTC AGGCACCTGG
TCGTTGATGG GTTTTGAAAG CAAAAAACCT TACACCACTG ACGAGGCGCT GGCCGCCAAT
ATCACCAACG AAGGCGGCGC GGAAGGGCGT TATCGGGTAC TGAAAAACAT TATGGGTTTG
TGGCTGCTCC AGCGCGTGCT GAAAGAACGG CGCATTACCG ATCTGCCTGC GCTTATCGCC
CAAACAGAAG CGCTGCCAGC CTGCCGTTTC CTGATTAACC CGAATGACGA TCGCTTTATC
AATCCTGACG ATATGCACGC CGAAATCCAG GCCGCCTGTC GCGAGACCGA CCAGCCCGTT
CCCGTCAGCG ATGCCGAACT GGCGCGCTGC ATTTTCGACA GTCTGGCGCT GTTGTATGCC
GACATTCTGC ACGAGCTGGC AAATCTGCGC GGCGAAAAAT TTACCCAACT GCATATTGTC
GGCGGCGGAT GCCAAAACGC ACTACTCAAC CAGTTGTGCG CCGATGCATG TGGTATTCGC
GTGATGGCCG GGCCGGTTGA AGCCTCCACC CTTGGCAATA TTGGTATTCA GCTTATGACC
CTCGACGAAT TAAACAACGT CGATGACTTC CGTCAGGTCG TCAGCGCTAA CTACGACCTG
ACAACCTATA TCCCTAATCC TGATAGTGAA ATTGCCCGCC ACGTTGCGCA GTTTCAACCC
AAACGACAGA CAAAGGAGCT TTGCGCATGA
 
Protein sequence
MTFRHCVAVD LGASSGRVML ARYDSKHRTL TLREIHRFVN CLQKTDGFDT WDIDSLEKDI 
RLGLKKVCNE GILIDSIGID TWGVDYVLLD KQGQRVGLPV SYRDNRTTGI MPQALVQIGK
SEIYRRSGIQ FLPFNTIYQL RALTKQQPEL TAQVAHALLM PDYFSYRLTG EMNWEYTNAT
TTQLVNINTD DWDDTLLAWT GAKKSWFGRP SHPGNVIGDW ICPQGNRIPV VAVASHDTAS
AVIASPLANK HSAYLSSGTW SLMGFESKKP YTTDEALAAN ITNEGGAEGR YRVLKNIMGL
WLLQRVLKER RITDLPALIA QTEALPACRF LINPNDDRFI NPDDMHAEIQ AACRETDQPV
PVSDAELARC IFDSLALLYA DILHELANLR GEKFTQLHIV GGGCQNALLN QLCADACGIR
VMAGPVEAST LGNIGIQLMT LDELNNVDDF RQVVSANYDL TTYIPNPDSE IARHVAQFQP
KRQTKELCA