Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4375 |
Symbol | rhaA |
ID | 6488649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 4260110 |
End bp | 4261369 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642744459 |
Product | L-rhamnose isomerase |
Protein accession | YP_002048048 |
Protein GI | 194450093 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4806] L-rhamnose isomerase |
TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTC AACTGGAACA AGCCTGGGAA CTGGCAAAAC AACGTTTCGC CGCAGTAGGT ATTGATGTCG AGGAGGCGCT GCGCCAGCTC GATCGCCTGC CGGTTTCCAT GCACTGCTGG CAGGGCGACG ATGTTGCCGG ATTCGAGAAC CCGGAAGGTT CGTTGACGGG CGGAATTCAG TCGACCGGCA ACTATCCGGG CAAAGCGCGT AACGCCACCG AACTGCGCGC CGATCTGGAA CAGGCGCTGC GTCTGATCCC AGGACCAAAA CGGCTGAACC TGCACGCCAT TTACCTTGAG TCGGATACGC CGGTTGCTCG CGACCAGATC AAACCGGAGC ATTTTAAAAA CTGGGTGGAG TGGGCGAAAG CGAACCGGCT GGGGCTGGAT TTCAACCCCA CCTGTTTTTC TCATCCACTG AGCGCTGACG GTTTTACCCT CTCTCATCCA GACGCGAAAA TTCGCCAGTT CTGGATCGAT CACTGCAAAG CCAGCCGCCG CGTCTCGGCA TACTTTGGTG AGCAGCTCGG TACGCCGTCG GTGATGAACA TCTGGATTCC GGACGGCATG AAAGACATTA CCGTCGACCG TTTAGCCCCG CGCCAGCGCC TGCTGGAAGC GCTGGATGAG GTCATTAGCG AGAAATTCGA CCCGGCGCAC CACATCGACG CCGTTGAGAG CAAACTGTTT GGCATCGGCG CGGAAAGCTA CACCGTCGGC TCCAATGAGT TCTACATGGG CTACGCCACC AGCCGTCAGA CCGCGCTGTG CCTTGATGCG GGCCACTTCC ATCCCACCGA AGTGATTTCC GACAAAATTT CCGCCGCCAT GCTCTACGTA CCACGGCTGC TGCTGCACGT CAGCCGCCCG GTACGCTGGG ATAGCGACCA CGTGGTGCTC CTGGACGATG AAACCCAGGC AATTGCCAGC GAGATCGTCC GTCATAACCT GTTCGACCGT GTGCATATCG GTCTGGATTT CTTCGACGCC TCTATCAACC GTGTCGCTGC GTGGGTTATC GGTACCCGCA ACATGAAAAA AGCGCTGCTG CGCGCTCTGC TGGAACCCAC AGATCAACTG CGTCAGCTTG AGGCCAGCGG CGATTACACC GCGCGTCTGG CGCTGCTGGA AGAGCAGAAA TCTCTGCCGT GGCAGGCCGT CTGGGAAATG TATTGCCAGC GTCACGACAC GCCGACTGGC AGCCAGTGGC TGGACAGCGT TCGCACCTAC GAAAAAGAGA TCCTGAGCAA ACGTAGCTGA
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Protein sequence | MTTQLEQAWE LAKQRFAAVG IDVEEALRQL DRLPVSMHCW QGDDVAGFEN PEGSLTGGIQ STGNYPGKAR NATELRADLE QALRLIPGPK RLNLHAIYLE SDTPVARDQI KPEHFKNWVE WAKANRLGLD FNPTCFSHPL SADGFTLSHP DAKIRQFWID HCKASRRVSA YFGEQLGTPS VMNIWIPDGM KDITVDRLAP RQRLLEALDE VISEKFDPAH HIDAVESKLF GIGAESYTVG SNEFYMGYAT SRQTALCLDA GHFHPTEVIS DKISAAMLYV PRLLLHVSRP VRWDSDHVVL LDDETQAIAS EIVRHNLFDR VHIGLDFFDA SINRVAAWVI GTRNMKKALL RALLEPTDQL RQLEASGDYT ARLALLEEQK SLPWQAVWEM YCQRHDTPTG SQWLDSVRTY EKEILSKRS
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