| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4309 |
|---|
| Symbol | fadB |
|---|
| ID | 6490765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 4197686 |
|---|
| End bp | 4200001 |
|---|
| Gene Length | 2316 bp |
|---|
| Protein Length | 771 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642744398 |
|---|
| Product | multifunctional fatty acid oxidation complex subunit alpha |
|---|
| Protein accession | YP_002047992 |
|---|
| Protein GI | 194449693 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 0.956942 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCTCTG CCGAGCGTGA TCACATCGGC ATTTCTTTAA TCATTTATTT GCATTTTATT
AACACAAAAT ACACACTTCG CTTCATCTGG TACGACCAGA TCACCTTGTG GATTCAGGAG
ACTGACATGC TTTATAAAGG CGACACCCTG TACCTCGACT GGCTGGAAGA TGGCATCGCC
GAACTGGTGT TCGATGCTCC AGGCTCGGTC AATAAACTCG ACACCGCAAC CGTCGCCAGC
CTCGGCCAGG CGCTTGAGGT GCTGGAAAAG CAACACGATT TAAAAGGGCT GCTGCTGCGC
TCTAATAAAG CGGCCTTTAT TGTCGGCGCG GACATCACCG AATTTCTTTC ACTGTTCCTC
GTCCCCGAAG AGCAGTTAAG CCAATGGCTG CATTTCGCTA ATAGCGTCTT TAACCGTCTG
GAAGATTTAC CCGTACCGAC CCTTGCCGCC GTAAACGGCT ATGCGCTGGG CGGCGGGTGC
GAATGCGTGC TGGCCACCGA TTACCGTCTG GCGACGCCAG ACCTCCGTAT CGGTCTGCCG
GAAACTAAAC TGGGTATCAT GCCGGGTTTC GGCGGCTCCG TTCGTCTGCC GCGTATGCTG
GGCGCAGACA GCGCGCTGGA GATTATCGCG GCAGGTAAAG ATGTCGGTGC TGAGCACGCG
CTGAAAATCG GCCTTGTGGA CGGCGTGGTC AAACAAGAGA AGCTAATTGA AGGCGCGATA
GCGGTGTTAC GCCAGGCCAT TACCGGCGAT CTCGACTGGA GAGCTAAACG CCAGCCGAAA
CTGGAACCGT TGAAACTCAG TAAGATTGAA GCAGCGATGA GCTTTACCAT CGCTAAAGGC
ATGGTCGCAC AAACGGCGGG TAAACATTAT CCGGCGCCGA TGACCGCAGT GAAAACCATT
GAAGCCGCCG CGCGTTTTGG TCGTGAAGAA GCGCTGAATC TGGAAAATAA AAGCTTTGTT
CCGCTGGCGC ATACCAATGA GGCTCGTGCG CTGGTCGGTA TCTTCCTCAA CGATCAATAT
GTAAAAGGTA AAGCCAAAAA GCTGACCAAA GATATTGAGA CGCCGAAACA GGCAGCCGTA
CTGGGCGCGG GCATTATGGG CGGCGGTATC GCTTACCAGT CGGCCTGGAA AGGCGTACCG
GTCATCATGA AAGATATCAA CGATAAATCG TTGAACCTCG GCATGACCGA AGCGGCCAAG
CTGCTGAACA AACAGCTGGA GCGCGGCAAG ATCGACGGTC TGAAGCTGGC GAGCGTCATT
TCGACCATCC ACCCGACTCT CGATTATGCC GGTTTCGATC GCGTAGATGT TGTTGTCGAA
GCGGTAGTCG AAAATCCGAA AGTGAAAAAA GCGGTACTGG CGGAAACCGA GCAGAAAGTG
CGCCCGGAAA CCGTGCTGGC CTCAAATACC TCCACCATCC CAATTGGCGA ACTGGCAAGC
GCCCTGGAAC GTCCGGAAAA CTTTTGCGGA ATGCACTTCT TCAACCCGGT ACACCGGATG
CCGCTGGTTG AAATCATTCG CGGCGAGAAG AGTTCAGACG AAACCATCGC CAAAGTCGTC
GCCTGGGCAA GCAAAATGGG CAAGACGCCG ATTGTAGTCA ACGACTGCCC CGGCTTCTTT
GTTAACCGCG TGCTGTTCCC CTATTTCGCC GGTTTCAGTC AACTGCTGCG CGACGGCGCG
GATTTCCGCA AAGTCGATAA AGTGATGGAA AAACAGTTCG GCTGGCCGAT GGGCCCGGCC
TATCTGCTCG ACGTGGTGGG TATTGATACC GCCCACCACG CGCAGGCGGT AATGGCGGCA
GGCTTCCCGC AACGGATGCA GAAAGAGTAT CGCGACGCGA TCGACGCATT GTTTGACGCC
AGCCGTTTTG GGCAAAAAAA CGGTCTGGGC TTCTGGCGCT ATAAAGAAGA CAGCAAGGGT
AAGCCGAAGA AAGAAGAAGA TGCCGCGGTG GATGACCTGC TGGCAAGCGT CAGCCAGCCG
AAACGCGACT TCAGCGACGA CGAGATAATC GCCCGTATGA TGATCCCGAT GATTAACGAA
GTGGTTCGCT GTCTGGAAGA AGGCATTATC GCAAGCCCGG CGGAAGCCGA TATGGCGCTG
GTCTACGGCC TGGGCTTCCC TCCGTTCCAC GGCGGCGCAT TCCGCTGGCT GGATACACAG
GGCAGCGCGA AATATCTTGA TATGGCGCAG CAGTATCAAC ACCTCGGCCC GCTGTATGAA
GTGCCGGAAG GGCTGCGTGA TAAAGCGCGC CATAACGAAC CGTATTATCC CCCGGTTGAA
CCAGCCCGTC CGGTTGGTTC TCTGAAAACG GCTTAA
|
|---|
| Protein sequence | MISAERDHIG ISLIIYLHFI NTKYTLRFIW YDQITLWIQE TDMLYKGDTL YLDWLEDGIA
ELVFDAPGSV NKLDTATVAS LGQALEVLEK QHDLKGLLLR SNKAAFIVGA DITEFLSLFL
VPEEQLSQWL HFANSVFNRL EDLPVPTLAA VNGYALGGGC ECVLATDYRL ATPDLRIGLP
ETKLGIMPGF GGSVRLPRML GADSALEIIA AGKDVGAEHA LKIGLVDGVV KQEKLIEGAI
AVLRQAITGD LDWRAKRQPK LEPLKLSKIE AAMSFTIAKG MVAQTAGKHY PAPMTAVKTI
EAAARFGREE ALNLENKSFV PLAHTNEARA LVGIFLNDQY VKGKAKKLTK DIETPKQAAV
LGAGIMGGGI AYQSAWKGVP VIMKDINDKS LNLGMTEAAK LLNKQLERGK IDGLKLASVI
STIHPTLDYA GFDRVDVVVE AVVENPKVKK AVLAETEQKV RPETVLASNT STIPIGELAS
ALERPENFCG MHFFNPVHRM PLVEIIRGEK SSDETIAKVV AWASKMGKTP IVVNDCPGFF
VNRVLFPYFA GFSQLLRDGA DFRKVDKVME KQFGWPMGPA YLLDVVGIDT AHHAQAVMAA
GFPQRMQKEY RDAIDALFDA SRFGQKNGLG FWRYKEDSKG KPKKEEDAAV DDLLASVSQP
KRDFSDDEII ARMMIPMINE VVRCLEEGII ASPAEADMAL VYGLGFPPFH GGAFRWLDTQ
GSAKYLDMAQ QYQHLGPLYE VPEGLRDKAR HNEPYYPPVE PARPVGSLKT A
|
|---|
| |