Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4279 |
Symbol | uvrD |
ID | 6489334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 4163913 |
End bp | 4166075 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642744369 |
Product | DNA-dependent helicase II |
Protein accession | YP_002047963 |
Protein GI | 194451500 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTTT CTTACCTGCT CGACAGCCTT AATGATAAAC AGCGCGAAGC GGTGGCCGCG CCACGTAGCA ACATGCTGGT GCTGGCGGGC GCGGGAAGCG GGAAAACCCG CGTGCTGGTG CACCGTATCG CCTGGTTACT GAGCGTAGAA AACAATTCGC CATACTCCAT CATGGCGGTG ACCTTTACCA ATAAAGCGGC GGCGGAAATG CGCCATCGTA TTGGCCAGTT GATGGGGACC AGCCAGGGCG GAATGTGGGT AGGGACGTTC CACGGTCTGG CGCACCGCCT GCTGCGCGCG CATCATATGG ACGCTAATTT GCCGCAGGAT TTCCAGATTC TCGACAGCGA AGATCAGATG CGTTTGCTTA AACGCCTGAT TAAGGCGATG AATCTTGATG AGAAGCAGTG GCCGCCGCGT CAGGCGATGT GGTACATCAA TAGCCAGAAA GACGAAGGGC TACGCCCGCA CCATATCCAA AGCTATGGCA ACCCGGTGGA GCAGACCTGG CAGAAGGTGT ATCAGGCCTA TCAGGAAGCG TGCGATCGCG CTGGTCTGGT GGATTTTGCC GAGCTACTGC TGCGCGCTCA TGAACTATGG CTGAACAAGC CGCACATCCT GCAACACTAT CGCGAGCGGT TTACTAACAT CCTGGTGGAC GAATTCCAGG ATACCAACAA CATTCAGTAC GCCTGGGTTC GTCTGCTGGC GGGCGATACC GGTAAGGTGA TGATCGTTGG CGACGATGAC CAGTCGATCT ACGGCTGGCG CGGGGCCCAG GTAGAGAACA TCCAGCGCTT CCTCAATGAT TTCCCCGGCG CGCAGACCAT TCGTCTGGAG CAGAATTACC GCTCGACCAG CAACATCCTT AGCGCGGCGA ACGCTCTGAT TGAAAACAAC AACGGGCGTT TGGGTAAAAA GCTGTGGACT GACGGCGTTG ATGGCGAACC GATATCGCTG TACTGCGCTT TCAACGAGCT GGATGAAGCG CGCTTTGTGG TTAATCGTAT CAAAACCTGG CAGGACAACG GCGGCGCGCT TGCGCAATGC GCCATCCTTT ATCGCAGCAA CGCCCAGTCG CGCGTGCTGG AAGAGGCGTT ATTACAGGCC AGTATGCCGT ACCGCATTTA CGGCGGGATG CGCTTCTTCG AACGCCAGGA GATCAAAGAT GCGCTCTCTT ATCTGCGTTT GATTGCCAAT CGCAACGATG ATGCCGCTTT TGAACGCGTG GTGAATACCC CAACGCGCGG TATCGGCGAC CGCACGCTGG ACGTGGTGCG CCAGACCTCG CGCGATCGCC AGCTAACATT GTGGCAGGCG TGCCGTGAAT TGTTACAGGA AAAAGCCCTG GCCGGGCGTG CGGCCAGCGC GCTGCAACGC TTTATGGAAC TGATCGACGC TCTGGCGCAG GAAACTGCCG ACATGCCGCT GCATGTGCAG ACTGACCGGG TGATCAAAGA TTCCGGCCTG CGCACCATGT ATGAGCAAGA AAAAGGCGAG AAAGGCCAGA CGCGCATCGA AAACTTAGAG GAACTGGTGA CGGCGACGCG GCAGTTCAGC TACAACGACG AAGATGAAGA TTTAATGCCA TTGCAGGCCT TCCTCTCTCA CGCGGCGCTG GAAGCGGGCG AGGGGCAGGC GGATACCTGG CAGGATGCGG TACAGCTGAT GACGCTGCAC TCGGCCAAAG GGCTGGAGTT CCCGCAGGTG TTTATCGTCG GGATGGAAGA GGGGATGTTC CCCAGCCAGA TGTCGCTGGA TGAGGGCGGG CGTTTGGAAG AGGAGCGTCG TCTGGCCTAC GTCGGCGTTA CCCGTGCCAT GCAGAAACTG ACGCTAACCT ATGCCGAAAC TCGCCGTCTG TATGGTAAAG AGGTCTACCA TCGCCCGTCG CGTTTCATCG GCGAACTGCC GGAGGAGTGC GTGGAAGAGG TCCGTCTGCG CGCCACCGTC AGTCGTCCGG TGAGCCATCA ACGAATGGGA ACGCCGCTGG CGGAAAACGA CACAGGCTAC AAACTCGGCC AACGCGTGCG CCATGCGAAG TTCGGCGAGG GAACTATTGT CAACCTGGAG GGCAGCGGCG AGCATAGCCG GTTGCAGGTG GCTTTTCAGG GGCAAGGGAT CAAATGGCTG GTTGCCGCGT ATGCGAAGCT GGAAACGGTT TGA
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Protein sequence | MDVSYLLDSL NDKQREAVAA PRSNMLVLAG AGSGKTRVLV HRIAWLLSVE NNSPYSIMAV TFTNKAAAEM RHRIGQLMGT SQGGMWVGTF HGLAHRLLRA HHMDANLPQD FQILDSEDQM RLLKRLIKAM NLDEKQWPPR QAMWYINSQK DEGLRPHHIQ SYGNPVEQTW QKVYQAYQEA CDRAGLVDFA ELLLRAHELW LNKPHILQHY RERFTNILVD EFQDTNNIQY AWVRLLAGDT GKVMIVGDDD QSIYGWRGAQ VENIQRFLND FPGAQTIRLE QNYRSTSNIL SAANALIENN NGRLGKKLWT DGVDGEPISL YCAFNELDEA RFVVNRIKTW QDNGGALAQC AILYRSNAQS RVLEEALLQA SMPYRIYGGM RFFERQEIKD ALSYLRLIAN RNDDAAFERV VNTPTRGIGD RTLDVVRQTS RDRQLTLWQA CRELLQEKAL AGRAASALQR FMELIDALAQ ETADMPLHVQ TDRVIKDSGL RTMYEQEKGE KGQTRIENLE ELVTATRQFS YNDEDEDLMP LQAFLSHAAL EAGEGQADTW QDAVQLMTLH SAKGLEFPQV FIVGMEEGMF PSQMSLDEGG RLEEERRLAY VGVTRAMQKL TLTYAETRRL YGKEVYHRPS RFIGELPEEC VEEVRLRATV SRPVSHQRMG TPLAENDTGY KLGQRVRHAK FGEGTIVNLE GSGEHSRLQV AFQGQGIKWL VAAYAKLETV
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