| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4278 |
|---|
| Symbol | |
|---|
| ID | 6488195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 4163061 |
|---|
| End bp | 4163777 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642744368 |
|---|
| Product | flavin mononucleotide phosphatase |
|---|
| Protein accession | YP_002047962 |
|---|
| Protein GI | 194448235 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 81 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTT ACCGGCCTTT GGGGCGTATT GCCGCGCTCA CCTTTGACCT GGATGATACC
CTTTATGATA ACCGTCCGGT GATTTTGCGT ACTGAGCAGG AAGCGCTCGC TTTTATGCAA
AATTATCACC CGTCGCTACG TTCGTTTCAA AACGTCGATT TACAGCGGAT ACGGCAGGCG
GTGCGTGAAG CGGAGCCGGA AATCTATCAT GACGTTACCC GCTGGCGCCA TCGTGCGATA
GAGCAGGCCA TGCGGGATGC GGGATTATCG GCGCAGGAGG CCATTGCCGG CGCGAATGCG
GCGATGATGC ATTTTGCCAA ATGGCGCAGC CAGATTGAGG TTCCGCAGGC TACCCATGAG
ACGTTACAGC AGCTTGCGAA AAAATGGCCG CTGGTGGCGA TCACTAACGG CAACGCCCAG
CCGGAACTGT TTGGCCTCGG CGATTACTTT AAGTTTGTAC TGCGCGCCGG CCCGGATGGA
CGTTCCAAGC CGTTTAGCGA CATGTATTTC CTGGCGGCGG AAAAGCTGCA TGTGCCGATC
GGCGAGATCC TGCATGTCGG CGATGATCTG ACTACCGATG TGGCTGGCGC TATTCGCTGT
GGGATGCAGG CCTGCTGGAT TAAACCTGAA AATGCCGACC TGATGCGGAC GCAGGACAGC
CGTTTACTGC CGCATATCGA AATTTCGCGG TTGGCATCTC TCACCTCGCT GATATAA
|
|---|
| Protein sequence | MRFYRPLGRI AALTFDLDDT LYDNRPVILR TEQEALAFMQ NYHPSLRSFQ NVDLQRIRQA
VREAEPEIYH DVTRWRHRAI EQAMRDAGLS AQEAIAGANA AMMHFAKWRS QIEVPQATHE
TLQQLAKKWP LVAITNGNAQ PELFGLGDYF KFVLRAGPDG RSKPFSDMYF LAAEKLHVPI
GEILHVGDDL TTDVAGAIRC GMQACWIKPE NADLMRTQDS RLLPHIEISR LASLTSLI
|
|---|
| |