Gene SeHA_C4277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4277 
SymbolxerC 
ID6492131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4162159 
End bp4163061 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content56% 
IMG OID642744367 
Productsite-specific tyrosine recombinase XerC 
Protein accessionYP_002047961 
Protein GI194447983 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATG TCGCGCTTTC TCTGGATGTC TCGCGGTTCC TGCGCTATTT AGGCGTGGAG 
CGCCAGCTTA GCCCCATTAC CCTGCAGAAC TACCAGCGTC AGCTTGATGC CATTATCGCT
TTAGCCGGAG AAACCGGGCT GAAAAGCTGG CAACAATGTG ACGCTGCGAT TGTGCGCAGT
TTTGCGGTGC GCAGTCGGCG CAAAGGGCTT GGCCCTGCCA GTCTGGCGCT ACGTCTCTCG
GCATTGCGAA GCTTTTTTGA CTGGTTAGTC AGTCAGGGCG AATTGAAAGC TAACCCGGCG
AAGGGTGTCT CCGCACCGAA AGCGCCGCGT CATCTGCCGA AAAATATTGA TGTCGACGAC
GTTAACCGCC TGCTGGACAT CGATCTTAAC GATCCGCTCG CCGTACGTGA TCGGGCGATG
CTGGAGGTCA TGTACGGCGC GGGGCTGCGT TTATCCGAAC TGGTTGGCCT GGATATAAAG
CACCTCGATC TTGATACCGG CGAAGTGTGG GTAATGGGTA AAGGCAGCAA AGAGCGACGC
CTGCCGATTG GCCGTAACGC GGTGACGTGG ATTGAGCACT GGCTGGATCT GCGCGGCCTG
TTCGCCAGCG ATGAAGAGGC GTTATTCCTG TCGAAGCTCG GCAAGCGTAT CTCCGCGCGC
AATGTCCAAA AACGGTTCGC CGAATGGGGC ATAAAGCAGG GGCTAAACAG CCACGTGCAT
CCACATAAGC TGCGCCATTC GTTCGCGACC CATATGCTGG AATCGAGCGG CGATCTGCGC
GGCGTGCAAG AGCTGCTGGG TCATGCCAAC CTTTCCACCA CCCAAATTTA TACTCATCTT
GATTTTCAAC ATCTTGCTTC AGTGTACGAC GCGGCGCATC CGCGCGCTAA ACGGGGGAAA
TAA
 
Protein sequence
MTDVALSLDV SRFLRYLGVE RQLSPITLQN YQRQLDAIIA LAGETGLKSW QQCDAAIVRS 
FAVRSRRKGL GPASLALRLS ALRSFFDWLV SQGELKANPA KGVSAPKAPR HLPKNIDVDD
VNRLLDIDLN DPLAVRDRAM LEVMYGAGLR LSELVGLDIK HLDLDTGEVW VMGKGSKERR
LPIGRNAVTW IEHWLDLRGL FASDEEALFL SKLGKRISAR NVQKRFAEWG IKQGLNSHVH
PHKLRHSFAT HMLESSGDLR GVQELLGHAN LSTTQIYTHL DFQHLASVYD AAHPRAKRGK