| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4255 |
|---|
| Symbol | |
|---|
| ID | 6489467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 4144702 |
|---|
| End bp | 4145952 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642744348 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002047946 |
|---|
| Protein GI | 194451729 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 93 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTTG CTAAAGCCTC CCTGTGGACG GCGGTCAGTA CGCTGGTAAA AATTGGCGCC
GGACTGCTGG TGGTGAAACT ACTGGCCGTC TCTTTTGGTC CGGCGGGCGT CGGACAAGCG
GGTAACTTCC GCCAGATGAT TACCGTGCTG GGCGTATTGG CTGGCGCCGG GATATTTAAC
GGCGTTACCA AACTTGTCGC ACAACATCAT GATAATCCGG CGCAGTTACG TACCGTGGTG
GGAACCTCCT CCGCGATGGT ATTGGGGTTC TCTACGCTGC TGGCGCTGGT CTTCTTGCTG
GCGGCGGCGC CGATTAGCCA GGGATTGTTC GGTCATACGG ACTATCAAGG GCTGGTGCGT
CTGGTTGCGC TGGTACAAAT GGGGATCGCC TGGGCGAACC TGCTGCTGGC GCTAATGAAG
GGCTTTCGTG ACGCGTCGGG TAATGCCTTA TCGTTAATTG TCGGCAGCTT TTTGGGCGTC
GCCGCCTGGT ATCTCTGCTA TCGTGTCGGC GGCTATGAAG GTGCTCTGCT TGGTCTGGCG
CTGGTGCCGG CGCTGGTGGT AGTGCCAGCC GGTATAATAC TGATTAAGCG CGGCACCGTC
CCGCTACGCT ATCTCAAGCC CTCCTGGGAT AATGGTCTGG CAGGGCAGCT CAGTAAATTT
ACCCTGATGG CGCTGATTAC CTCCGTTACG ATGCCGGTCG CCTATGTGAT GATGCGAAAC
CAACTGGCCG CGCACTATAG CTGGAGCGAT GTCGGGATCT GGCAGGGCGT AAGCAGTATT
TCTGACGCCT ATCTGCAATT TATCACCGCC TCCTTCAGTG TTTACCTGTT ACCCACGCTC
TCACGCCTGA CGGAAAAACA GGACATTACG CGTGAAGTGG TAAAAGCGCT GAAATTTGTT
TTACCGGCGG TTGCGGCGGC GAGTTTTACC GTCTGGCTAC TGCGCGATTT TGCTATCTGG
CTGCTTTTTT CCGCCAAATT CACCGCGATG CGCGATCTGT TCGCCTGGCA GTTAGTGGGC
GACGTGCTGA AAGTCGGCGC CTATGTTTTC GGTTATCTGG TGATTGCCAA AGCGTCGTTG
CGATTTTACA TTCTGGCTGA AATTAGCCAG TTCATTCTGT TAACGGCGTT CGCTCACTGG
CTGATTCCCG CTCACGGCGC GCTGGGTGCG GCACAGGCTT ATATGGCCAC CTATATTGTC
TATTTTTCAC TTTGTTGCGG CGTATTTTTA CTCTGGCGTA GGCGAGCATG A
|
|---|
| Protein sequence | MSLAKASLWT AVSTLVKIGA GLLVVKLLAV SFGPAGVGQA GNFRQMITVL GVLAGAGIFN
GVTKLVAQHH DNPAQLRTVV GTSSAMVLGF STLLALVFLL AAAPISQGLF GHTDYQGLVR
LVALVQMGIA WANLLLALMK GFRDASGNAL SLIVGSFLGV AAWYLCYRVG GYEGALLGLA
LVPALVVVPA GIILIKRGTV PLRYLKPSWD NGLAGQLSKF TLMALITSVT MPVAYVMMRN
QLAAHYSWSD VGIWQGVSSI SDAYLQFITA SFSVYLLPTL SRLTEKQDIT REVVKALKFV
LPAVAAASFT VWLLRDFAIW LLFSAKFTAM RDLFAWQLVG DVLKVGAYVF GYLVIAKASL
RFYILAEISQ FILLTAFAHW LIPAHGALGA AQAYMATYIV YFSLCCGVFL LWRRRA
|
|---|
| |