Gene SeHA_C4254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4254 
SymbolwecE 
ID6487873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4143570 
End bp4144700 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content54% 
IMG OID642744347 
ProductTDP-4-oxo-6-deoxy-D-glucose transaminase 
Protein accessionYP_002047945 
Protein GI194451216 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID[TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCTT TTAATGCGCC GCCGGTGGTG GGAACCGAAC TCGAATACAT GCAGTCTGCA 
ATGAGCAGCG GCAAACTGTG CGGCGACGGC GGCTTTACGC GTCGTTGCCA GCAGTGGCTG
GAGCAACATT TCGGCAGCGC GAAGGTGTTG CTGACGCCTT CCTGTACCGC GTCGCTGGAG
ATGGCGGCTC TGTTGTTGGA TATTCAGCCC GGCGATGAAG TGATCATGCC GAGCTTTACG
TTTGTCTCCA CCGCTAACGC TTTTGTCCTG CGCGGCGCGA AAATTGTGTT TGTCGATATT
CGTCCGGATA CGATGAATAT TGACGAAACG CTGATTGAGG CGGCGATTAC TGATAAAACC
CGCGCTATCG TGCCGGTACA CTACGCTGGC GTCGCTTGTG AAATGGACGT CATCATGGCG
CTGGCGGATA AGTATAATCT GTTCGTTGTC GAGGATGCCG CCCAGGGTGT GATGTCCACG
TACAAAGGGC GCGCATTAGG GACGATCGGT CACATCGGCT GTTTTAGCTT CCATGAAACC
AAAAATTACA CCGCTGGCGG CGAAGGCGGC GCGACGCTGA TCAACGATCG TACGCTGATT
GAACGCGCGG AGATCATCCG CGAAAAAGGC ACCAACCGTA GCCAGTTCTT CCGTGGTCAG
GTGGATAAAT ACACCTGGCG GGATATCGGC TCCAGTTATT TGATGTCCGA TCTGCAGGCT
GCCTACCTGT GGGCGCAACT GGAGGCCGCC GATCGTATCA ATCAACAGCG TCTGTCGCTG
TGGCAGACTT ACTACGATGC GTTAACGCCG CTGGCGCACG CCGGGCGTAT CGAGCTGCCT
TCTATTCCGG AAAACTGCGG GCATAATGCC CATATGTTTT ACATCAAACT GCGGGATATC
GCCGATCGCA GCGCGCTGAT TAATTTCCTG AAAGAGGCGG AAATCATGGC GGTATTCCAT
TACATTCCGC TGCATGATTG TCCGGCGGGC GATAAATTCG GCGAGTTTAT CGGGGACGAT
GTCTACACCA CAAAAGAGAG CGAACGTTTG TTGCGTCTGC CGCTGTTTTA TAACCTTGCG
CCCGTCGATC AACGAACGGT GATTACTACC TTGCTAAATT ATTTCTCCTG A
 
Protein sequence
MIPFNAPPVV GTELEYMQSA MSSGKLCGDG GFTRRCQQWL EQHFGSAKVL LTPSCTASLE 
MAALLLDIQP GDEVIMPSFT FVSTANAFVL RGAKIVFVDI RPDTMNIDET LIEAAITDKT
RAIVPVHYAG VACEMDVIMA LADKYNLFVV EDAAQGVMST YKGRALGTIG HIGCFSFHET
KNYTAGGEGG ATLINDRTLI ERAEIIREKG TNRSQFFRGQ VDKYTWRDIG SSYLMSDLQA
AYLWAQLEAA DRINQQRLSL WQTYYDALTP LAHAGRIELP SIPENCGHNA HMFYIKLRDI
ADRSALINFL KEAEIMAVFH YIPLHDCPAG DKFGEFIGDD VYTTKESERL LRLPLFYNLA
PVDQRTVITT LLNYFS