Gene SeHA_C4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4221 
Symbol 
ID6488054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4108838 
End bp4109542 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content51% 
IMG OID642744315 
ProductGntR family transcriptional regulator 
Protein accessionYP_002047919 
Protein GI194451346 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000881899 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value0.895287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTAA GCGCACAACA ATTAGCCGCA CAGAAAAATC TATCCTATGT TCTGGCTGAA 
AAGCTGGCGC AGCGGATATT AAAGGGTGAC TACGCCCCCG GTACGATTCT TCCCGGCGAA
ATAGAACTGG GCGAGCAGTA CGGCGTAAGT CGAACGGCAG TTCGCGAAGC GGTGAAAACG
TTGACGGCTA AAGGTATGGT GCTACCTCGT CCGCGCATTG GTACGCGGGT GATGCCGCAG
GGAAACTGGA ACTTTCTGGA TCAAGAGCTG CTGACCTGGT GGATGACGGA AGAAAATTTT
CATCAGGTGG TAGAGCATTT TCTGGTGATG CGTATTAGCC TGGAGCCGCA AGCCTGCCTG
CTGGCGGCGA CTCTTGGCAC ACCGGAGCAG AAAGCGCGGC TTAATGCCTT AATGGAAGAG
ATGGTCGCGC TGAAAAAGCA TTTTAAGCGT GAACGCTGGA TTGAAGTGGA TATGGCGTGG
CACGAGCATA TCTACGAAAT GAGCGCCAAT CCCTTTCTAA TCTCTTTTGC GACGCTATTT
CATTCGGTTT ATCACACTTA CTTTACCTCA ATCACCTATA ACGAGGTGGT AAAGCTGGAT
TTGCACCAGG CCATTGTTGA TGCCATCGCT GATGGCGACG GCGAACGCGC TTTCCAGGCC
TGCCAGGCGT TGTTAATAGC GCCCAATGAG AGACCAGATA ATTAA
 
Protein sequence
MPLSAQQLAA QKNLSYVLAE KLAQRILKGD YAPGTILPGE IELGEQYGVS RTAVREAVKT 
LTAKGMVLPR PRIGTRVMPQ GNWNFLDQEL LTWWMTEENF HQVVEHFLVM RISLEPQACL
LAATLGTPEQ KARLNALMEE MVALKKHFKR ERWIEVDMAW HEHIYEMSAN PFLISFATLF
HSVYHTYFTS ITYNEVVKLD LHQAIVDAIA DGDGERAFQA CQALLIAPNE RPDN