Gene SeHA_C4219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4219 
SymbolrbsR 
ID6489511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4106435 
End bp4107433 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID642744313 
Producttranscriptional repressor RbsR 
Protein accessionYP_002047917 
Protein GI194450603 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.817954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.878921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTACTA TGAAAGATGT TGCCCGCCTG GCGGGAGTCT CTACATCGAC GGTCTCTCAC 
GTTATTAACA AAGATCGCTT TGTGAGTGAG ACGATAACCG AAAAAGTTGA AGCGGCGATT 
AAATCGCTCA ACTATGCGCC TTCTGCGCTG GCGCGAAGCC TCAAGTTAAA CCAGACCCGC 
ACGATTGGTA TGCTAATTAC CGCCAGTACC AACCCTTTTT ATTCCGAACT GGTGCGCGGC 
GTTGAGCGAA GCTGTTTTGA GCGCGGTTAT AGTCTGGTGC TGTGCAATAC CGAAGGCGAC 
GAGCAACGGA TGAACCGCAA CCTGGAGACG CTGATGCAAA AACGGGTAGA CGGTTTACTG 
CTGCTGTGTA CCGAAACGCA TCAGCCTTCT CGTGAAATCA TGGAGCGTTA TCCGTCTATT 
CCTACCGTCA TGATGGACTG GTCGCCGTTT GATGGTGAGG GCGATAGCGA TCTCATTCAG 
GATAATTCGT TGCTAGGCGG CGATCTTGCT ACCCAATACC TTATCGATAA AGGATTTACC 
CGAATAGCCT GTATTACCGG CCCGCTGGAC AAAACGCCAG CGCGTTTACG GCTGGAAGGG 
TATCGGGCGG CGATGAAACG CGCAGGGCTG GCTATTCCGC AAGGCTATGA GATCACCGGC 
GATTTTGAAT TTGGCGGCGG CTTTGACGCC ATGCAGGCGT TACTCGCCCA TCAACAGCGA 
CCGCAAGCGG TTTTTACCGG AAACGATGCG ATGGCTGTCG GCGCCTATCA GGCGCTATAT 
CAGGCGGGGC TTCGTATTCC GCAGGATATG GCAGTCATTG GCTATGATGA TATTGAGCTG 
GCGCGCTATA TGACGCCGCC GCTGACGACT ATCCATCAGC CGAAAGATGA ATTGGGCGAG 
CTGGCTATTG ATGTGTTGAT TCATCGGATG GCGCAGCCCG CCTTGCAACA ACAGCGACTT 
CAGCTTACTC CGGTTTTGAC GGTGCGTGGG TCGGTTTAG
 
Protein sequence
MATMKDVARL AGVSTSTVSH VINKDRFVSE TITEKVEAAI KSLNYAPSAL ARSLKLNQTR 
TIGMLITAST NPFYSELVRG VERSCFERGY SLVLCNTEGD EQRMNRNLET LMQKRVDGLL 
LLCTETHQPS REIMERYPSI PTVMMDWSPF DGEGDSDLIQ DNSLLGGDLA TQYLIDKGFT 
RIACITGPLD KTPARLRLEG YRAAMKRAGL AIPQGYEITG DFEFGGGFDA MQALLAHQQR 
PQAVFTGNDA MAVGAYQALY QAGLRIPQDM AVIGYDDIEL ARYMTPPLTT IHQPKDELGE 
LAIDVLIHRM AQPALQQQRL QLTPVLTVRG SV