Gene SeHA_C4217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4217 
SymbolrbsB 
ID6488190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4104478 
End bp4105368 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID642744311 
ProductD-ribose transporter subunit RbsB 
Protein accessionYP_002047915 
Protein GI194448635 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.730139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value0.765182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA AAAAACTGGC TACCCTGGTA TCTGCTGTTG CGCTGAGCGC CACCGTGAGC 
GCGAATGCAA TGGCGAAAGA CACCATTGCG CTGGTGATCT CTACCCTCAA TAATCCCTTC
TTCGTGTCGT TAAAAGACGG GGCGCAAAAA GAGGCGGATA AACTGGGTTA TAACCTGGTG
GTGCTGGACT CCCAGAACAA CCCTGCCAAA GAGCTGGCGA ACGTGCAGGA TTTAACCGTT
CGCGGGACCA AAATTCTGCT GATCAACCCG ACTGACTCCG ATGCGGTGGG TAACGCGGTG
AAGATGGCGA ACCAGGCGAA GATTCCGGTT ATCACGCTTG ACCGCCAGGC AACCAAAGGC
GATGTCGTCA GCCATATCGC GTCTGATAAC GTGCTGGGCG GTAAGATCGC TGGCGACTAT
ATCGCGAAAA AAGCTGGCGA AGGCGCCAAA GTGATTGAGT TGCAAGGCAT TGCCGGAACA
TCTGCGGCGC GTGAGCGTGG CGAAGGTTTC CAGCAGGCGG TAGCCGCCCA CAAATTTAAT
GTCCTGGCCA GCCAGCCTGC TGATTTCGAC CGTACTAAGG GTCTGAACGT CATGCAGAAC
CTGCTAACCG CGCATCCGGA TGTTCAGGCT GTCTTCGCCC AGAACGATGA AATGGCGCTG
GGCGCACTGC GCGCACTGCA AACTGCCGGT AAAGCAGATG TGATGGTGGT TGGATTTGAC
GGTACGCCGG ATGGCGAAAA GGCCGTAAAA GATGGCAAAC TGGCAGCGAC TATCGCTCAG
TTACCGGATC AAATCGGCGC CAAAGGCGTT GAAGTGGCGG ATAAGGTGTT GAAAGGCGAA
AAAGTTCAGG CCAAATATCC GGTTGACCTG AAACTGGTCA TCAAGCAGTA A
 
Protein sequence
MNMKKLATLV SAVALSATVS ANAMAKDTIA LVISTLNNPF FVSLKDGAQK EADKLGYNLV 
VLDSQNNPAK ELANVQDLTV RGTKILLINP TDSDAVGNAV KMANQAKIPV ITLDRQATKG
DVVSHIASDN VLGGKIAGDY IAKKAGEGAK VIELQGIAGT SAARERGEGF QQAVAAHKFN
VLASQPADFD RTKGLNVMQN LLTAHPDVQA VFAQNDEMAL GALRALQTAG KADVMVVGFD
GTPDGEKAVK DGKLAATIAQ LPDQIGAKGV EVADKVLKGE KVQAKYPVDL KLVIKQ