Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4192 |
Symbol | glmS |
ID | 6490700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 4078926 |
End bp | 4080755 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642744286 |
Product | glucosamine--fructose-6-phosphate aminotransferase |
Protein accession | YP_002047890 |
Protein GI | 194449829 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGAA TTGTTGGCGC TATCGCGCAG CGTGATGTAG CTGAAATCCT TCTCGAAGGT TTACGTCGTC TGGAATACCG CGGATATGAC TCTGCCGGTC TGGCCGTGGT GGATGCAGAA GGTCATATGA CCCGCCTGCG TCGCCTCGGT AAAGTCCAGA TGCTGGCTCA GGCAGCGGAA GAACATCCTC TGCATGGCGG CACTGGTATT GCTCACACTC GCTGGGCGAC GCACGGTGAA CCTTCAGAAG CTAACGCGCA TCCGCATGTT TCTGAACACA TTGTGGTGGT GCATAACGGC ATCATCGAAA ACCATGAACC GCTGCGTGAA GCGTTAAAAG CGCGTGGCTA TACCTTCGTT TCTGAAACCG ACACCGAAGT GATTGCACAC CTGGTAAACT GGGAACTGAA ACAGGGCGGT ACTCTGCGTG AGGCTGTTCT GCGTGCTATC CCGCAACTGC GTGGTGCGTA CGGTACAGTG ATCATGGATA CCCGTCACCC GGATACCCTA CTGGCGGCAC GTTCTGGTAG CCCGCTGGTG ATTGGCCTGG GTATGGGCGA AAACTTTATC GCTTCTGACC AGCTGGCGCT GTTGCCAGTG ACTCGTCGCT TTATCTTCCT TGAAGAGGGC GATATCGCTG AAATCACTCG CCGTTCGGTA AATATCTTCG ATAACACCGG CGCGGAAGTA AAACGTCAGG ATATCGAATC CAATCTGCAA TATGACGCGG GCGATAAAGG TATTTACCGC CACTACATGC AGAAAGAGAT CTACGAACAG CCGAACGCGA TCAAAAACAC CCTTACCGGG CGCATCAGCC ACGGTCAGGT GGATTTAAGC GAGCTGGGAC CGAACGCCGA TGATCTGTTG TCGAAGGTTG AGCATATTCA GATCCTCGCC TGCGGTACGT CTTACAACTC CGGTATGGTT TCCCGTTACT GGTTTGAATC GCTGGCAGGT ATTCCGTGCG ACGTTGAAAT CGCCTCTGAA TTCCGTTATC GCAAATCTGC CGTGCGCCGT AACAGCCTGA TGATCACCCT GTCACAGTCT GGCGAAACCG CAGATACCCT GGCTGGCCTG CGTCTGTCGA AAGAGCTGGG ATATTTGGGC TCTCTGGCAA TTTGTAACGT GCCGGGATCT TCGCTGGTGC GTGAATCCGA TCTGGCGCTG ATGACCAACG CGGGTACGGA AATTGGCGTA GCATCTACCA AAGCCTTCAC CACCCAGTTA ACCGTGCTGT TGATGCTGGT GGCGAAACTG GCGCGTCTGA AAGGTCTGGA TACGTCCATT GAGCATGATA TCGTTCATGG CCTACAGGCG CTGCCGAGCC GTATTGAGCA GATGCTGTCG CAGGACAAAC GTATCGAAGC CCTGGCGGAA GATTTCTCTG ACAAACACCA TGCGCTGTTC CTGGGGCGTG GCGATCAATA TCCGATTGCG CTCGAAGGCG CGCTGAAGCT GAAAGAGATC TCTTACATTC ACGCGGAAGC CTATGCTGCA GGCGAGCTGA AACACGGGCC GTTGGCGCTG ATTGACGCCG ATATGCCGGT GATTGTGGTG GCGCCGAACA ACGAACTGCT GGAGAAACTG AAATCCAACA TCGAAGAAGT TCGCGCACGT GGCGGTCAGT TGTACGTCTT CGCCGATCAG GATGCGGGTT TCGTCAGCAA CGACAACATG CACATCATCG AGATGCCGCA TGTGGAAGAG GTCATTGCGC CTATCTTCTA CACCGTTCCG CTGCAACTGC TGGCGTATCA CGTGGCGCTG ATTAAAGGCA CCGACGTTGA CCAGCCGCGT AACCTGGCGA AATCGGTTAC CGTAGAGTAA
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Protein sequence | MCGIVGAIAQ RDVAEILLEG LRRLEYRGYD SAGLAVVDAE GHMTRLRRLG KVQMLAQAAE EHPLHGGTGI AHTRWATHGE PSEANAHPHV SEHIVVVHNG IIENHEPLRE ALKARGYTFV SETDTEVIAH LVNWELKQGG TLREAVLRAI PQLRGAYGTV IMDTRHPDTL LAARSGSPLV IGLGMGENFI ASDQLALLPV TRRFIFLEEG DIAEITRRSV NIFDNTGAEV KRQDIESNLQ YDAGDKGIYR HYMQKEIYEQ PNAIKNTLTG RISHGQVDLS ELGPNADDLL SKVEHIQILA CGTSYNSGMV SRYWFESLAG IPCDVEIASE FRYRKSAVRR NSLMITLSQS GETADTLAGL RLSKELGYLG SLAICNVPGS SLVRESDLAL MTNAGTEIGV ASTKAFTTQL TVLLMLVAKL ARLKGLDTSI EHDIVHGLQA LPSRIEQMLS QDKRIEALAE DFSDKHHALF LGRGDQYPIA LEGALKLKEI SYIHAEAYAA GELKHGPLAL IDADMPVIVV APNNELLEKL KSNIEEVRAR GGQLYVFADQ DAGFVSNDNM HIIEMPHVEE VIAPIFYTVP LQLLAYHVAL IKGTDVDQPR NLAKSVTVE
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