Gene SeHA_C4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4179 
Symbol 
ID6490450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4065124 
End bp4066083 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content54% 
IMG OID642744273 
ProductDNA-binding transcriptional regulator YidZ 
Protein accessionYP_002047877 
Protein GI194451776 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.542905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT CCCTTACCAG TCTCGATCTT AATCTGCTGT TATGCCTACA GTTACTCATG 
CAGGAGCGCA GCGTCACTAA AGCTGCAAAA CGGATGAACG TAACGCCCTC AGCGGTCAGC 
AAATCGCTGG CGAAACTCCG GGCATGGTTT GACGATCCGC TGTTCGTCAA TACGCCGCTG 
GGCCTGGCGC CGACGCCGCT GATGGTCAGT ATGGAGCAAA GTCTGGCGGA CTGGATGCAG 
ATGGGGAATC AACTGCTTGA TAAACCGCAT CATCAAACGC CGCGCGGTTT AAAATTTGAG 
TTGGCAGCAG AGTCGCCGCT GATGATGATT ATGTTTAATT CACTGTCGCA GCAGATTTAT 
CAGCGCTATC CGCAGGCTAC CATTAAGGTT CGCAACTGGG ATTATGACTC GCTGGAGGCG 
ATTACGCGTG GGGAAGTCGA TATCGGATTT ACCGGACGCG AAAGCCATCC CCGCTCGCGA 
GAATTGCTCA GTCTGTTACC GCTCGCGATT GATTTTGAGG TGTTGTTTAG CGATTTACCG 
TGGGTCTGGC TGCGGGAAGA TCATCCGGCG CTGCGCGAAG CGTGGGATCT GGACACTTTT 
CTGCGCTACC CACATATCAG TATTTGCTGG GAGCAAAGCG ATACCTGGGC GCTGGACGAT 
GTCCTGCAAG AAATGGGACG CAAACGCCAT ATCGCGTTGA GCCTGCCGGG GTTCGAGCAG 
TCGCTCTTTA TGGCCGCCCA GCCGGGTCAC ACCCTGATAG CAACCGCGCC GCGCTATTGC 
CAGCACTACA ATCAGCTCCA CCAGCTACCG TTAGTGGCGC GCCCCCTGCC TTTTGATGCG 
CAACAGCGGG AAAAGCTGAT GGTGCCGTTT ACCCTATTAT GGCACAAACG TAATAGTCAT 
AATCCCAAGA TTGTGTGGCT ACGACAGGCT ATCAACACGC TCTGCCGTCG CCTTATCTGA
 
Protein sequence
MKKSLTSLDL NLLLCLQLLM QERSVTKAAK RMNVTPSAVS KSLAKLRAWF DDPLFVNTPL 
GLAPTPLMVS MEQSLADWMQ MGNQLLDKPH HQTPRGLKFE LAAESPLMMI MFNSLSQQIY 
QRYPQATIKV RNWDYDSLEA ITRGEVDIGF TGRESHPRSR ELLSLLPLAI DFEVLFSDLP 
WVWLREDHPA LREAWDLDTF LRYPHISICW EQSDTWALDD VLQEMGRKRH IALSLPGFEQ 
SLFMAAQPGH TLIATAPRYC QHYNQLHQLP LVARPLPFDA QQREKLMVPF TLLWHKRNSH 
NPKIVWLRQA INTLCRRLI