| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4177 |
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| Symbol | trmE |
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| ID | 6487779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 4062382 |
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| End bp | 4063785 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642744271 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002047875 |
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| Protein GI | 194447879 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.357651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCCT TTTTTATTGC AACAAAGTTG AGACTAACCA TGAGCCATAA CGACACTATC
GTCGCCCAGG CAACCCCACC GGGACGCGGT GGCGTGGGTA TCCTGCGTAT CTCTGGTCTG
AAAGCGCGCG ACGTTGCGCA AGAGGTGCTG GGCAAGCTGC CGAAGCCGCG CTATGCCGAC
TACCTGCCGT TTAAAGACGT TGACGGCAGC GCGCTGGATC AGGGTATTGC GCTGTGGTTC
CCCGGCCCAA ACTCCTTCAC CGGTGAAGAT GTGCTGGAGC TACAAGGGCA CGGCGGTCCG
GTGATCCTGG ACCTGCTGTT AAAACGTATC CTGACGCTTC CAGGCGTGCG CATTGCCCGA
CCTGGCGAGT TCTCCGAGCG AGCGTTCCTC AACGATAAGC TCGATTTAGC CCAGGCGGAA
GCCATTGCCG ACCTGATCGA TGCCAGTTCC GAACAGGCGG CGCGTTCGGC GCTAAACTCG
TTACAGGGGG CATTTTCCGC CCGCGTTAAC CACCTTGTGG AAGCACTTAC TCACCTGCGA
ATCTACGTCG AAGCGGCTAT CGATTTTCCG GATGAGGAGA TCGACTTTCT CTCTGACGGC
AAAATTGAAG CGCAGCTCAA TGGCGTCATC GCCGATCTTG ACGCCGTGCG CACCGAAGCG
CGCCAGGGCA GCCTGCTGCG CGAAGGGATG AAGGTAGTGA TTGCCGGACG CCCGAATGCC
GGGAAATCCA GCCTGCTGAA TGCGCTGGCA GGCCGTGAAG CGGCCATTGT CACCGATATC
GCCGGTACCA CGCGCGACGT GTTGCGCGAG CATATTCACA TCGACGGGAT GCCGCTGCAT
ATCATCGATA CCGCCGGACT GCGCGACGCC AGCGACGAAG TTGAGCGTAT CGGCATCGAA
CGCGCCTGGC AGGAGATTGA ACAGGCCGAT CGCGTGCTGT TTATGGTGGA TGGCACCACG
ACGGACGCCG TTGACCCTGC CGACATCTGG CCGGACTTTA TCGCCCGTCT GCCCAAAAAT
CTACCGATTA CCGTGGTACG TAACAAGGCG GATATCACCG GCGAAACGTT GGGTATTAGT
GAAGTAAACG GTCACTCACT GGTTCGCCTC TCGGCGCGTA CCGGCGAAGG CGTCGACGTG
TTGCGTAACC ACCTCAAGCA GAGCATGGGG TTTGATACCA ATATGGAAGG CGGCTTCCTG
GCCCGCCGCC GTCACCTACA GGCGCTGGCG GAAGCCGCTG AACACCTTGA GCAGGGCAAA
GCGCAGCTAT TAGGCGCATG GGCGGGGGAA CTGCTGGCGG AAGAGTTGCG CCTGGCGCAG
CAAAGCTTAA GCGAGATTAC CGGCGAGTTT ACCTCCGACG ACCTGCTGGG ACGGATTTTC
TCCAGCTTCT GTATCGGCAA ATAA
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| Protein sequence | MTAFFIATKL RLTMSHNDTI VAQATPPGRG GVGILRISGL KARDVAQEVL GKLPKPRYAD
YLPFKDVDGS ALDQGIALWF PGPNSFTGED VLELQGHGGP VILDLLLKRI LTLPGVRIAR
PGEFSERAFL NDKLDLAQAE AIADLIDASS EQAARSALNS LQGAFSARVN HLVEALTHLR
IYVEAAIDFP DEEIDFLSDG KIEAQLNGVI ADLDAVRTEA RQGSLLREGM KVVIAGRPNA
GKSSLLNALA GREAAIVTDI AGTTRDVLRE HIHIDGMPLH IIDTAGLRDA SDEVERIGIE
RAWQEIEQAD RVLFMVDGTT TDAVDPADIW PDFIARLPKN LPITVVRNKA DITGETLGIS
EVNGHSLVRL SARTGEGVDV LRNHLKQSMG FDTNMEGGFL ARRRHLQALA EAAEHLEQGK
AQLLGAWAGE LLAEELRLAQ QSLSEITGEF TSDDLLGRIF SSFCIGK
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