Gene SeHA_C4166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4166 
Symbol 
ID6488527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4049565 
End bp4050827 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content48% 
IMG OID642744261 
Productputative permease 
Protein accessionYP_002047865 
Protein GI194451338 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.378129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.74612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGG CCCTTACCGC CCCCCCAACC AGGAAAAGAT TTTTAATCGT TGCCTGTCTG 
TTTATTGGAA TATTTATTGC TTATCTCGAT CGCGTTAATG TTTCGGTATT AGCCGCGAAT 
GAACCCTTCT TAGCCTATAT GGGTATTGAA GGTATGCCAT TGCAAATCGG CATGATGATG 
ACCGTCTTTC TGGCCGCTTA TGGTATCGCT AACGTTGTAT TATCACCGCT TGGTGATTAT 
CTCGGCCCCA GAAAAGCAAT GATGCTTTGT ATTCTGATCT GGACTATCGC TTTAATGATT 
GGCGGAGTCG CTACATCATT CGCTCTAATT ATTATTTGCC GTATATTACT GGGCATCGGA 
GAGGGATTTT ATTATCCACT GCAAAGCGTA TTTATTAAAA ACTGGTTTCC GAAGCAGGAG 
CGTGGCCGGG CAAACGCAGC GTGGATCGTC GGCCAGTCGG TCGCGCCCGC CATTGCGATG 
CCTTTTTTCA CCTGGTGGAT AGGCACCCAC GGCTGGCGTT CCAACTTCTT TTTATGCGCC 
GCTCTCGGGT TAATTCCACT CTGGCTGCTA TGGCGATATG TTGCTGATAA ACCAGAACAA 
CTTAAAGGTA TCAGCGAGCA GGAACTGGCT TATATCAAAG CCGGGCAGGA AACGGAAAGC 
GCAGGCAGCA GCGAAAGTTT TATGTTGCGG GTAAAACCGG TGATTACCAA CTATTGCTAC 
TGGTTGCTGG TGCTGTGGTA CCTGTGTCTG CAATGCCTGT ACTGGGGGAT GATTACCTGG 
CTGCCAACCT ATCTTAAATC AGCCAGAGGA TTTAGCTGGG CAGAAATGGG CTGGCTGGCG 
TCGCTGCCAT TTGTCTTGTC GATATTTTCC AAAGCCGCCG CGGGCGTCTT CGTCGATAAA 
ATAGGACGCA GCGCCCCCAT ATTAATGGTG TTAATGTTTT TCGCCGGTAT CAGTATCTAT 
TTCGGCACAA TAACCGAACA CAAATATATG TCAGCGGTAC TACTCTCCTT CGCCGTCGCT 
TTTTGCACGA TGGGTACGCC CGTTGCCTGG ACGTTATTAC AGGGAATGAT ACCAGGAAAA 
TCCATATCCG CCGCCAGCGG CGTAATGAAC GGCGTCGCCA ATGGACTCTC TTCATTATCC 
CCCGTATTTA TCGGTTTATT TATCTCTATT ACAGGAACTT ATACCGGCGG CTTATTATGT 
CTGGTTTTCA TCAGCGCTAT CGCCGTGGTA TCGGCATTAA TCTTAACGAT TAAAAAATAT 
TAA
 
Protein sequence
MSMALTAPPT RKRFLIVACL FIGIFIAYLD RVNVSVLAAN EPFLAYMGIE GMPLQIGMMM 
TVFLAAYGIA NVVLSPLGDY LGPRKAMMLC ILIWTIALMI GGVATSFALI IICRILLGIG 
EGFYYPLQSV FIKNWFPKQE RGRANAAWIV GQSVAPAIAM PFFTWWIGTH GWRSNFFLCA 
ALGLIPLWLL WRYVADKPEQ LKGISEQELA YIKAGQETES AGSSESFMLR VKPVITNYCY 
WLLVLWYLCL QCLYWGMITW LPTYLKSARG FSWAEMGWLA SLPFVLSIFS KAAAGVFVDK 
IGRSAPILMV LMFFAGISIY FGTITEHKYM SAVLLSFAVA FCTMGTPVAW TLLQGMIPGK 
SISAASGVMN GVANGLSSLS PVFIGLFISI TGTYTGGLLC LVFISAIAVV SALILTIKKY