| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4132 |
|---|
| Symbol | dsdA |
|---|
| ID | 6491333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 4018662 |
|---|
| End bp | 4019984 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642744228 |
|---|
| Product | D-serine dehydratase |
|---|
| Protein accession | YP_002047832 |
|---|
| Protein GI | 194449575 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3048] D-serine dehydratase |
|---|
| TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.293568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 100 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA TACAAAAGCT CATCGCCCGG TATCCTTTGG TCGAGGATCT GGTCGCCCTC
AAAGAAACCA CCTGGTTTAA CCCGGGCGCC ACCTCTCTTG CACAAGGTCT ACCGTATGTC
GGCCTGACGG AGCAGGACGT AAACGCCGCC CATGACCGTC TGGCGCGCTT TGCGCCGTAT
CTGGCGAAAG CGTTTCCGCA AACCGCTGCC GCTGGCGGCA TGATCGAATC TGACGTGGTC
GCTATTCCGG CCATGCAAAA GCGGCTGGAA AAAGAGTATG GGCAAACGAT CGACGGTGAA
ATGCTGTTAA AAAAAGACAG TCACCTGGCA ATCTCTGGTT CCATTAAAGC GCGCGGCGGC
ATCTACGAGG TGCTAACGCA CGCGGAAAAA CTGGCGCTGG AGGCGGGTCT GTTAACCACC
GACGATGACT ATAGCGTGTT GCTTTCGCCG GAATTTAAAC AATTCTTCAG CCAGTACAGT
ATCGCCGTCG GTTCAACCGG CAATCTGGGG CTATCGATCG GTATCATGAG CGCCTGCATC
GGTTTTAAAG TGACGGTACA TATGTCTGCC GACGCCCGCG CCTGGAAAAA AGCGAAGCTG
CGTAGCCACG GCGTGACGGT CGTAGAATAC GAAGATGATT ACGGCGTGGC GGTTGAGCAG
GGCCGTAAAG CAGCGCAATC CGATCCAAAC TGTTTCTTTA TCGACGATGA AAACTCTCGC
ACGCTATTTC TGGGCTATGC GGTAGCGGGT CAGCGTCTGA AAGCGCAATT CGCTCAACAG
GGACGCGTCG TTGACGCCAG TCACCCACTG TTTGTTTATC TGCCGTGCGG CGTTGGCGGC
GGCCCTGGCG GCGTCGCCTT TGGCCTGAAA CTGGCGTTTG GCGACAACGT CCACTGTTTC
TTTGCCGAAC CGACCCATTC ACCCTGCATG TTACTCGGCG TTTATACCGG TCTGCACGAT
GCCATCTCAG TACAAGATAT CGGTATTGAT AACCTGACGG CGGCTGACGG CCTGGCGGTA
GGTCGCGCTT CGGGCTTTGT TGGGCGGGCA ATGGAGCGTC TGCTTGACGG CCTTTATACC
TTAGACGATC AAACAATGTA TGACATGCTG GGCTGGCTGG CGCAGGAGGA AGGAATTCGA
CTGGAGCCAT CAGCTCTGGC GGGGATGGCC GGACCACAGC GCATTTGCGC CGCCGCCGCG
TATCAGCAAA GGCATGGATT CAGTCAGACG CAGCTCGGCA ACGCGACGCA TCTGGTATGG
GCAACCGGGG GCGGCATGGT GCCGGAAGAT GAAATGGAAC AATACCTGGC GAAAGGACGC
TAA
|
|---|
| Protein sequence | MENIQKLIAR YPLVEDLVAL KETTWFNPGA TSLAQGLPYV GLTEQDVNAA HDRLARFAPY
LAKAFPQTAA AGGMIESDVV AIPAMQKRLE KEYGQTIDGE MLLKKDSHLA ISGSIKARGG
IYEVLTHAEK LALEAGLLTT DDDYSVLLSP EFKQFFSQYS IAVGSTGNLG LSIGIMSACI
GFKVTVHMSA DARAWKKAKL RSHGVTVVEY EDDYGVAVEQ GRKAAQSDPN CFFIDDENSR
TLFLGYAVAG QRLKAQFAQQ GRVVDASHPL FVYLPCGVGG GPGGVAFGLK LAFGDNVHCF
FAEPTHSPCM LLGVYTGLHD AISVQDIGID NLTAADGLAV GRASGFVGRA MERLLDGLYT
LDDQTMYDML GWLAQEEGIR LEPSALAGMA GPQRICAAAA YQQRHGFSQT QLGNATHLVW
ATGGGMVPED EMEQYLAKGR
|
|---|
| |