Gene SeHA_C4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4116 
Symbol 
ID6488854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3998648 
End bp3999391 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content41% 
IMG OID642744212 
Productputative GntR family transcriptional regulator 
Protein accessionYP_002047816 
Protein GI194450893 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones112 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT TGAGTAAAAG TTCACACATC CCACTGTATC AACAGGTTGT GGAGTGGATA 
AGGGAAAGTA TTTATAGCGG AGAATTAGTT GAGGATGACC GGATACCTTC AGAGTTTCAA 
ATCATGGATA TGCTGGAGGT GAGTCGCGGT ACCGTTAAAA AAGCGGTTGA CCAACTTGTC 
CGGGAAGGTG TTCTTGTGCA AGTGCAGGGT AAAGGAACTT TCGTAAAGAA GGAAAATGTT 
GCTTACCCAC TGGGTGAAGG TTTGCTCTCC TTTGCTGAAG CCTTAGCCAG CCAGAAGATA 
AACTTCACAA CCAGTGTCAT AACCTCCCGA CTGGAACCCG CTAACCGCTT TGTAGCAGAG 
AAACTGAGTA TCAAACCGGG ACAAGATGTT TTATTTCTTA AACGCCTTCG TTGTATTGGC 
GATGAAAAAG TCATGTTGAT TGAAAATCGT ATCAACATTG ATCTCTGCCC CGGTATTATT 
GATGTAGATT TTACCAGGGA GAATTTATTT TCAGCAATAG AAAGATTATC TGATAAGAAA 
ATAAGTTTTT CTGAAAGCCG TTACGCAGCC AAATTAATTG GTAATGAGCG AGGCCATTAT 
CTTGATATTG GTGAAGACGC ACCTGTTTTG CATTTGGAAC AGTTGGTATT TTTCTCTAGA 
GGATTGGCCA TTGATTTTGG TAACGTCTGG TTAAAAGGTA ATAAATATTA TCTTGGCACT 
ATTTTACAGC GCCTGGATGC CTGA
 
Protein sequence
MKTLSKSSHI PLYQQVVEWI RESIYSGELV EDDRIPSEFQ IMDMLEVSRG TVKKAVDQLV 
REGVLVQVQG KGTFVKKENV AYPLGEGLLS FAEALASQKI NFTTSVITSR LEPANRFVAE 
KLSIKPGQDV LFLKRLRCIG DEKVMLIENR INIDLCPGII DVDFTRENLF SAIERLSDKK 
ISFSESRYAA KLIGNERGHY LDIGEDAPVL HLEQLVFFSR GLAIDFGNVW LKGNKYYLGT 
ILQRLDA