Gene SeHA_C4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4100 
Symbol 
ID6489103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3984723 
End bp3985472 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content56% 
IMG OID642744197 
ProductPTS system sorbose-specific iic component 
Protein accessionYP_002047801 
Protein GI194447885 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.95492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones102 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCT TACTCTTTGC AAGCCTGATG GGGTTGTATT ACTGGTTTGC CCGTTTACGC 
CTCGGCTACA CCTTCTCCGC GATGCTGTTA CAACCGGTGG TGATCGCGGT ATTTGTCGGG
CTTTTGCTTG GCAATATGCA GACCGCGATG ATCATCGGCG CAGGGATGCA GCTCGTTTAT
TTGGGCGTGA CCTCAACGCC GGGCGGCAAC GTGCCGTCGG ACCCGGCGCT GGCGGCCTGT
ATCTCCATTC CTATCGCGGT GAAGGCCGGT ATGGACCCAA ACCTGGCGAT CGCGCTGGCA
ATCCCGTTTG GCGTGATTGG CGTGTTTCTC GATCAGCTTA GGCGCACGCT GAACGCCGCC
TGGATGCATA TGGCGGATAA ACACGCGGAA ACGGCAAACA TGGCGGGCAT CATGCGTTGC
GCCTTTCTTT ACCCGGCATT GCTGGGGCTG GTGCTGCGCT TCCCGGTGGT CTTTGCCGCT
AACTACTTTG GCCAGGATGT GGTGGAAAGT TTCCTTAAAC TGATGCCGCA CTGGTTAACC
CACTCCTTTG AAATCATGGG CGGCATTCTG CCGGCACTGG GCTTTGCCAT CACCATTATG
GTGATCGGTA AAAAGAGCCT GTTGCCGTGG TTTATCGGCG GGTTCTTCGC GGTGTTATAC
CTCAAGGTCG ACATCATGGC GATGGCCATC TTCGGCACCT GTGTCGCCTT CCTGATTAAA
GGCCTGGCGA AAAATGAAGG AGCAGCATGA
 
Protein sequence
MDTLLFASLM GLYYWFARLR LGYTFSAMLL QPVVIAVFVG LLLGNMQTAM IIGAGMQLVY 
LGVTSTPGGN VPSDPALAAC ISIPIAVKAG MDPNLAIALA IPFGVIGVFL DQLRRTLNAA
WMHMADKHAE TANMAGIMRC AFLYPALLGL VLRFPVVFAA NYFGQDVVES FLKLMPHWLT
HSFEIMGGIL PALGFAITIM VIGKKSLLPW FIGGFFAVLY LKVDIMAMAI FGTCVAFLIK
GLAKNEGAA