Gene SeHA_C4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4046 
Symbol 
ID6489438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3928958 
End bp3929755 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID642744147 
Productlipopolysaccharide core biosynthesis protein RfaP 
Protein accessionYP_002047752 
Protein GI194451054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.710683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGC TGAAAGCGCC GTTAACCACA CTATGGCGCG GTAAAGATGC TTTTGAGGAA 
GTAAAAACGT TACAGGGCGA AGTGTTCAGA GAGCTGGAGA CGCGTCGAAC ATTGCGGTTT 
GAGCTGGACG GTAAAAGCTA CTTCCTGAAG TGGCATAAAG GCACTTCGCT GAAAGAAATT 
GTGAAGAACC TGATTTCGTT ACGTATGCCT GTTCTGGGCG CTGACAGAGA ATGGCACGCC 
ATTCATCGTC TACATGAGCT GGGCGTTGAT ACGATGCACG GCGTTGGTTT TGGTGAAAAA 
GGCGTAAACC CGCTAACCAG AACATCATTT ATTATCACCG AAGATTTAAC GCCCACCATT 
AGCCTTGAAG ACTACTGTGC TGACTGGGCT GTTAATCCAC CGGACGCGCA GGTGAAGTGG 
ATGATCATTA AGCGTGTTGC GACTATGGTA CGTAAAATGC ACGCCGGGGG AATTAACCAT 
CGCGACTGTT ATATTTGCCA CTTTCTTCTG CATTTACCTT TCACTGGTCG CGAAGAGGAT 
TTAAAAATCT CCGTAATTGA CCTGCATCGC GCGCAGATAC GCCAGCACGT TCCCCTTCGC 
TGGCGTGACA AAGATTTAAT TGGGCTTTAT TTTTCTTCAA TGAATATTGG CCTGACTCAG 
CGAGATATAT TCCGGTTTAT GCGTGAGTAT TTCTCTCTCC CCCTGCGAGA GATTTTGCAA 
AAAGAATCGG GGTTGATTCA TCAGGCAGAT GTTAAAGCCG CTCGAATTAA AGAAAGGACA 
ATAAGAAAAA ATCTGTAA
 
Protein sequence
MVELKAPLTT LWRGKDAFEE VKTLQGEVFR ELETRRTLRF ELDGKSYFLK WHKGTSLKEI 
VKNLISLRMP VLGADREWHA IHRLHELGVD TMHGVGFGEK GVNPLTRTSF IITEDLTPTI 
SLEDYCADWA VNPPDAQVKW MIIKRVATMV RKMHAGGINH RDCYICHFLL HLPFTGREED 
LKISVIDLHR AQIRQHVPLR WRDKDLIGLY FSSMNIGLTQ RDIFRFMREY FSLPLREILQ 
KESGLIHQAD VKAARIKERT IRKNL