Gene SeHA_C4041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4041 
Symbol 
ID6489434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3924776 
End bp3925474 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content33% 
IMG OID642744142 
Productlipopolysaccharide core biosynthesis protein 
Protein accessionYP_002047747 
Protein GI194448518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.763682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTG AAAAAAAGAT TAAAAACTAT ACCGTCTTTG TCAAAAAAGA CGGTGAAAAA 
TACATTGAGA TATTCAAAGA TTTTCTATCT TATAATCATC AGGTTATTAA AGTCTTCCGT 
AATATAGAAG ATACAAAAGT TGTATTGATT AATACAGACT ACGGAAAATA TATTCTCAAA 
GTATTTAGTC CAAAAGTAAA AAATACTGAA CGCTTTTTCA AATCGTTAGT AAAAGGAGAT 
TACTACGAAA AGCTTTTTCA TCAGACAGAT CGTGTGCGGC GTGAAGGGTT TGCGGCGCTT 
AATGATTTTT ACCTGCTGGC GGAAATTAAA ACATTACGCT ATGTAAAAAC ATACGTGATG 
ATAATTGAGT ATATTGAAGG TATTGAACTT GTTGATATGC CAGAAATTTC TGACGAGGTG 
AGAGGGAAAA TCAAACAGTC GATATATTCT CTGCATCAGC ATGGTATGGT TTCGGGCGAT 
CCCCATAAAG GTAACTTTAT CCTGCAAGGC AATGAGATCA GAATTATCGA TTTGTCCGGA 
AAAAGACCTT CCAGACAACG AAAAGCAAAG GATCGTATTG ATTTAGAAAG ACATTATGGT 
ATCAAAAATA ATGTGAGAGA TATCGGATTT TACTTATTGA TTTATAAGAA AAAACTCCGA 
AATTTCTTGC GTCGTATTAA GGGTAAGGAA AAACGCTGA
 
Protein sequence
MIIEKKIKNY TVFVKKDGEK YIEIFKDFLS YNHQVIKVFR NIEDTKVVLI NTDYGKYILK 
VFSPKVKNTE RFFKSLVKGD YYEKLFHQTD RVRREGFAAL NDFYLLAEIK TLRYVKTYVM 
IIEYIEGIEL VDMPEISDEV RGKIKQSIYS LHQHGMVSGD PHKGNFILQG NEIRIIDLSG 
KRPSRQRKAK DRIDLERHYG IKNNVRDIGF YLLIYKKKLR NFLRRIKGKE KR