Gene SeHA_C4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4040 
Symbol 
ID6491888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3923817 
End bp3924626 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content38% 
IMG OID642744141 
Productlipopolysaccharide core biosynthesis protein 
Protein accessionYP_002047746 
Protein GI194449967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCG TTAACTTCAT AACTCACGCC GATGTTCTGC AACTTATTGC GAAAAGAACG 
GCTGAAGATT GTATTATTTT TCTTTCTGGT CCTACGTCCA GAAAGACGCC GCTGTCCTTG 
TTACGAATGA AAGATGTCAT TGCAGTCAAT GGTTCTGTTC AATATTTGCT AAACAATAAC 
GTCAAGCCAT TTTTGTACCT TCTGACGGAT ATTCGCTTCC TCCATCGTCG GCGCGAAGAT 
TTTTATAACT TTAGCCGTAA CAGTCAGTTT ACTATCGTCA ATCTTGATGT GTACGAACAG 
GCTTCAGTGG ATGATCAAAA ATATATTGAA GAAAACTGTT TAATTATTCG CTCCTTTTAT 
CGCCGAGAAA AAGGGGGCTT TTTAAAGAAA ATTAAATTTA ATATCCTCAA GCGGGTTCAT 
AAAGCATTAC TTATTTCAGT TCCTCTTTCG AAAAGAGGGC GACTGGCTGG ATTTTGCAAG 
GATATCAGCA TCGGGTATTG CTCTTGCCAT ACTATTGCTT ATACCGCTAT TCAGGTTGCC 
TATTCCCTCA AGTATGGCCG TATTATATGT TCTGGGCTTG ACTTAACAGG GAGTTGCCCA 
CGTTTCTATG ACGAATCTAC CAGCCCTATG CCATCTGAGC TTAGTAAAGA TCTGTTTAAA 
ATACTGCCAT TTTTTACTTT TATGAGAAAA AATGTGAGTG ATTTAAATAT CTTTAATTTA 
TCAGATGATA CTGCAATTCA TTACGATATT ATTCCATATA TTACAGCCTC GGAGCTTGAG 
GATGAAATAT ATTACGATAA AATTGTCTAG
 
Protein sequence
MGSVNFITHA DVLQLIAKRT AEDCIIFLSG PTSRKTPLSL LRMKDVIAVN GSVQYLLNNN 
VKPFLYLLTD IRFLHRRRED FYNFSRNSQF TIVNLDVYEQ ASVDDQKYIE ENCLIIRSFY 
RREKGGFLKK IKFNILKRVH KALLISVPLS KRGRLAGFCK DISIGYCSCH TIAYTAIQVA 
YSLKYGRIIC SGLDLTGSCP RFYDESTSPM PSELSKDLFK ILPFFTFMRK NVSDLNIFNL 
SDDTAIHYDI IPYITASELE DEIYYDKIV