Gene SeHA_C4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4001 
Symbol 
ID6491432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3877912 
End bp3878727 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content55% 
IMG OID642744102 
Productputative transcriptional regulator 
Protein accessionYP_002047707 
Protein GI194451710 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.940351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.48087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC TATCCATGAC ATTACCGATT AAAGTCCAAA ACGGCGGATT ATTTATTTCT 
CGCGGCATTG GGCGTCATCC TGCCAGGCGT CTGCAATCGT GGGAAATTAT ATTTGTGGAA
AAAGGCTGCC TGAAAATTCA GGAAGAAGAA TGTGTTTTCT GTGTCGAAGC CGGGGAAAGC
CTGTTGCTTT GGCCGCATCG CCGCCATATT GGCGTTGAGG AGTTTCCCGC CGATCTTAAA
TTTTACTGGC TCCATTTTGA GGTCAAAGCG CCGGACAGCG ACCCGCGCTG GCTGACGCAT
CTTTCCGTGC CGCAGCATAC CCAGGTTGCC GATCCGCAGG CGCTGATTGC GCTTTTTCGC
CAGTTTATGA ACGAGCAGGA AAAGCACCAG CGCAGCCCGG CGCTGGAGTT CATCGTGCTG
CTGATTTTGC AGCAGCTCAC CGTTGACGCC CGGCAGAATG AAAACGCCGA GGCCGCTGGC
GTGTCGCTGG CCTGGAAAGT GCAGCAGCTG ATTCGAACGC ACTATCACCT GCCGCTTTCC
AGCTCGGTTC TGGCGAAAGA ACTGCATTGC AATGTGGATT ATCTGGGACG TGTTTATCGG
CGGGTATTTC ACCTTACGCT AACGGAAGCC ATCCACCGCC AGCGGGTGCG CGAGGCGGAA
AAGTTGCTGA TTAGCGACGC GCGTTCGTTA AAAGAGGTGG CGGAGCGGTG CGGTTTTAAT
GACGTTGGTT ACTTTCGCCA GATCTTCCGC AAGCACACCG GCCTGACGCC TACCGCCTGG
AAGCGGCGCT ACAGTAAGGA ACACGTTAAT TCTTGA
 
Protein sequence
MLELSMTLPI KVQNGGLFIS RGIGRHPARR LQSWEIIFVE KGCLKIQEEE CVFCVEAGES 
LLLWPHRRHI GVEEFPADLK FYWLHFEVKA PDSDPRWLTH LSVPQHTQVA DPQALIALFR
QFMNEQEKHQ RSPALEFIVL LILQQLTVDA RQNENAEAAG VSLAWKVQQL IRTHYHLPLS
SSVLAKELHC NVDYLGRVYR RVFHLTLTEA IHRQRVREAE KLLISDARSL KEVAERCGFN
DVGYFRQIFR KHTGLTPTAW KRRYSKEHVN S