Gene SeHA_C3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3999 
Symbol 
ID6489222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3876202 
End bp3877062 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content58% 
IMG OID642744100 
Productputative L-xylulose 5-phosphate 3-epimerase 
Protein accessionYP_002047705 
Protein GI194447417 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3623] Putative L-xylulose-5-phosphate 3-epimerase 
TIGRFAM ID[TIGR00542] hexulose-6-phosphate isomerase, putative 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.873782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATC ATCCATTAGG TATTTACGAG AAAGCGCTGG CGAAGGATCT CAGCTGGCCT 
GAGCGGCTGG TGCTGGCAAA AAGCTGCGGT TTTGATTTTG TCGAGATGTC GGTGGACGAA
ACGGATGAAC GCCTTTCGCG CCTCGAATGG ACCTCGGCCC AACGCGCTTC GCTGGTGAAC
GCGATGCTGG AAAGCGGCGT CGCCATCCCG TCGATGTGCC TCTCCGCCCA TCGTCGCTTC
CCTTTTGGCA GCCGCGACGA AGCGGTACGC CAGCGGGCGC GTGAAATCAT GACCAAAGCC
ATTCGCCTGG CGCGCGATCT CGGTATCCGC ACCATCCAGT TGGCAGGTTA CGACGTCTAT
TACGAAGAGC ACGACGAAGG CACCCAGCAA CGTTTCGCCG AAGGGCTGGC GTGGGCGGTG
GAACAGGCCG CAGCGGCGCA GGTGATGCTG GCGGTGGAGA TCATGGATAC CGCGTTTATG
AACTCCATCA GCAAGTGGAA AAAGTGGGAC GAGATGCTTT CGTCACCGTG GTTCACCGTT
TATCCAGACG TCGGCAACCT CAGCGCCTGG GGGAACGACG TGACCGCCGA GCTGAAGCTG
GGTATCGACC GTATCGCCGC TATCCACCTG AAAGACACGC TGCCGGTGAC CGGTGACAGC
CCCGGCCAGT TCCGCGACGT GCCGTTTGGC GAAGGATGCG TTGATTTTGT CGGCATCTTC
AAAACGCTGC ATGAGCTGAA CTATCGCGGT TCATTTTTGA TTGAGATGTG GACGGAGAAA
GCCAGCGAGC CGGTGCTGGA AATTATCCAG GCCCGCCGCT GGATTGAATC ACGGATGCAG
GAAGGAGGTT TCACATGTTA G
 
Protein sequence
MRNHPLGIYE KALAKDLSWP ERLVLAKSCG FDFVEMSVDE TDERLSRLEW TSAQRASLVN 
AMLESGVAIP SMCLSAHRRF PFGSRDEAVR QRAREIMTKA IRLARDLGIR TIQLAGYDVY
YEEHDEGTQQ RFAEGLAWAV EQAAAAQVML AVEIMDTAFM NSISKWKKWD EMLSSPWFTV
YPDVGNLSAW GNDVTAELKL GIDRIAAIHL KDTLPVTGDS PGQFRDVPFG EGCVDFVGIF
KTLHELNYRG SFLIEMWTEK ASEPVLEIIQ ARRWIESRMQ EGGFTC