Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3999 |
Symbol | |
ID | 6489222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 3876202 |
End bp | 3877062 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642744100 |
Product | putative L-xylulose 5-phosphate 3-epimerase |
Protein accession | YP_002047705 |
Protein GI | 194447417 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3623] Putative L-xylulose-5-phosphate 3-epimerase |
TIGRFAM ID | [TIGR00542] hexulose-6-phosphate isomerase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 0.873782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAATC ATCCATTAGG TATTTACGAG AAAGCGCTGG CGAAGGATCT CAGCTGGCCT GAGCGGCTGG TGCTGGCAAA AAGCTGCGGT TTTGATTTTG TCGAGATGTC GGTGGACGAA ACGGATGAAC GCCTTTCGCG CCTCGAATGG ACCTCGGCCC AACGCGCTTC GCTGGTGAAC GCGATGCTGG AAAGCGGCGT CGCCATCCCG TCGATGTGCC TCTCCGCCCA TCGTCGCTTC CCTTTTGGCA GCCGCGACGA AGCGGTACGC CAGCGGGCGC GTGAAATCAT GACCAAAGCC ATTCGCCTGG CGCGCGATCT CGGTATCCGC ACCATCCAGT TGGCAGGTTA CGACGTCTAT TACGAAGAGC ACGACGAAGG CACCCAGCAA CGTTTCGCCG AAGGGCTGGC GTGGGCGGTG GAACAGGCCG CAGCGGCGCA GGTGATGCTG GCGGTGGAGA TCATGGATAC CGCGTTTATG AACTCCATCA GCAAGTGGAA AAAGTGGGAC GAGATGCTTT CGTCACCGTG GTTCACCGTT TATCCAGACG TCGGCAACCT CAGCGCCTGG GGGAACGACG TGACCGCCGA GCTGAAGCTG GGTATCGACC GTATCGCCGC TATCCACCTG AAAGACACGC TGCCGGTGAC CGGTGACAGC CCCGGCCAGT TCCGCGACGT GCCGTTTGGC GAAGGATGCG TTGATTTTGT CGGCATCTTC AAAACGCTGC ATGAGCTGAA CTATCGCGGT TCATTTTTGA TTGAGATGTG GACGGAGAAA GCCAGCGAGC CGGTGCTGGA AATTATCCAG GCCCGCCGCT GGATTGAATC ACGGATGCAG GAAGGAGGTT TCACATGTTA G
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Protein sequence | MRNHPLGIYE KALAKDLSWP ERLVLAKSCG FDFVEMSVDE TDERLSRLEW TSAQRASLVN AMLESGVAIP SMCLSAHRRF PFGSRDEAVR QRAREIMTKA IRLARDLGIR TIQLAGYDVY YEEHDEGTQQ RFAEGLAWAV EQAAAAQVML AVEIMDTAFM NSISKWKKWD EMLSSPWFTV YPDVGNLSAW GNDVTAELKL GIDRIAAIHL KDTLPVTGDS PGQFRDVPFG EGCVDFVGIF KTLHELNYRG SFLIEMWTEK ASEPVLEIIQ ARRWIESRMQ EGGFTC
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