Gene SeHA_C3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3990 
Symbol 
ID6490168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3867700 
End bp3868500 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content53% 
IMG OID642744091 
Producthth-type tranScriptional regulator yiaj 
Protein accessionYP_002047696 
Protein GI194450917 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.776659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA ACAACGATAA AGAGAAGCCT GCGGGGAGTC AGAGCCTGTT TCGTGGCCTG 
ATGTTGATAG AAATTTTGAG TAACTACCCG AACGGTTGCC CGCTGGCGCA CCTGTCGGAG 
CTGGCGGGGT TGAACAAGAG TACCGTCCAT CGGTTGTTAC AGGGGCTTCA ATCCTGCGGA 
TACGTGACGC CAGCGCCGGC GGCCGGAAGC TACCGTCTGA CGACAAAGTT TATTGCCGTC 
GGCCAAAAAG CCCTGTCATC GCTGAATATC ATCCACGTTG CGGCACCGCA CCTTGAGGCG 
CTCAACCTGG CCACCGGCGA GACGGTGAAT TTTTCCAGCC GTGAAGATGA CCACGCTATC 
CTGATTTATA AGCTGGAACC GACCACCGGT ATGCTGCGCA CGCGTGCCTA CATTGGCCAG 
CATATGCCGC TGTACTGCTC GGCGATGGGG AAAATTTATA TGGCGTTTGG TCAGCCGGAT 
TATGTGGCGT CTTACTGGGA AAGCCATAAA GATCAGATCC AGCCGCTGAC TCGTAATACC 
ATTACCGATT TACCAGCAAT GTACGATGAG CTGGCGCAAA TTCGTGAAAC CAGCATGGCG 
ATGGATCGCG AAGAAAATGA ACTGGGCGTT TCCTGTATTG CTGTGCCTGT GTTTGATATT 
CACCATCGAG TGCCTTACGC CATTTCTATT TCACTGTCGA CGTCACGGCT AAAACAGATC 
GGCGAGAAAA ATCTGCTCAA ACCGTTGCGT GAAACCGCAC AGGCTATCTC TAATGAGCTG 
GGATTTACCG TTCGCGAATA A
 
Protein sequence
MSQNNDKEKP AGSQSLFRGL MLIEILSNYP NGCPLAHLSE LAGLNKSTVH RLLQGLQSCG 
YVTPAPAAGS YRLTTKFIAV GQKALSSLNI IHVAAPHLEA LNLATGETVN FSSREDDHAI 
LIYKLEPTTG MLRTRAYIGQ HMPLYCSAMG KIYMAFGQPD YVASYWESHK DQIQPLTRNT 
ITDLPAMYDE LAQIRETSMA MDREENELGV SCIAVPVFDI HHRVPYAISI SLSTSRLKQI 
GEKNLLKPLR ETAQAISNEL GFTVRE