Gene SeHA_C3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3968 
Symbol 
ID6489678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3845898 
End bp3846560 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID642744070 
Productputative outer membrane lipoprotein 
Protein accessionYP_002047675 
Protein GI194450414 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.508971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GTGTATTTGT GATTGCTGCC ATCGTGAGCG GCGCCCTGGC AGTATCTGGC 
TGCACAACAA ACCCTTACAC CGGCGAACGC GAAGCAGGTA AATCCGGCAT TGGCGCGGGT
ATTGGATCGC TGGTCGGCGC AGGCATCGGC GCACTCTCCT CCTCCAAAAA AGATCGCGGT
AAAGGCGCGC TGATTGGCGC GGCGGCTGGC GCGGCGCTGG GCGGCGGCGT GGGTTACTAC
ATGGACGTAC AGGAAGCGAA ACTGCGTGAC AAAATGCGGG GCACAGGCGT TAGCGTGACG
CGAAGCGGCG ATAATATCAT TCTGAATATG CCGAATAATG TCACCTTCGA CAGCAGCAGC
GCGACGCTGA AACCGGCAGG CGCTAACACG CTGACCGGCG TGGCGATGGT GCTGAAAGAG
TATCCCAAGA CCGCCGTCAA TGTGGTGGGC TACACCGACA GCACCGGTAG CCACGATCTG
AATATGCGTC TGTCGCAACA GCGTGCTGAC TCCGTCGCCA GTTCGCTGAT CACCCAGGGC
GTTGACGCCA GCCGTATCCG TACCAGCGGA ATGGGTCCGG CGAACCCGAT CGCCAGCAAC
AGTACGGCAG AAGGTAAAGC GCAAAACCGC CGCGTCGAAA TTACCTTGAG TCCATTGCAG
TAA
 
Protein sequence
MKKRVFVIAA IVSGALAVSG CTTNPYTGER EAGKSGIGAG IGSLVGAGIG ALSSSKKDRG 
KGALIGAAAG AALGGGVGYY MDVQEAKLRD KMRGTGVSVT RSGDNIILNM PNNVTFDSSS
ATLKPAGANT LTGVAMVLKE YPKTAVNVVG YTDSTGSHDL NMRLSQQRAD SVASSLITQG
VDASRIRTSG MGPANPIASN STAEGKAQNR RVEITLSPLQ