Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3968 |
Symbol | |
ID | 6489678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 3845898 |
End bp | 3846560 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642744070 |
Product | putative outer membrane lipoprotein |
Protein accession | YP_002047675 |
Protein GI | 194450414 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.508971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 96 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC GTGTATTTGT GATTGCTGCC ATCGTGAGCG GCGCCCTGGC AGTATCTGGC TGCACAACAA ACCCTTACAC CGGCGAACGC GAAGCAGGTA AATCCGGCAT TGGCGCGGGT ATTGGATCGC TGGTCGGCGC AGGCATCGGC GCACTCTCCT CCTCCAAAAA AGATCGCGGT AAAGGCGCGC TGATTGGCGC GGCGGCTGGC GCGGCGCTGG GCGGCGGCGT GGGTTACTAC ATGGACGTAC AGGAAGCGAA ACTGCGTGAC AAAATGCGGG GCACAGGCGT TAGCGTGACG CGAAGCGGCG ATAATATCAT TCTGAATATG CCGAATAATG TCACCTTCGA CAGCAGCAGC GCGACGCTGA AACCGGCAGG CGCTAACACG CTGACCGGCG TGGCGATGGT GCTGAAAGAG TATCCCAAGA CCGCCGTCAA TGTGGTGGGC TACACCGACA GCACCGGTAG CCACGATCTG AATATGCGTC TGTCGCAACA GCGTGCTGAC TCCGTCGCCA GTTCGCTGAT CACCCAGGGC GTTGACGCCA GCCGTATCCG TACCAGCGGA ATGGGTCCGG CGAACCCGAT CGCCAGCAAC AGTACGGCAG AAGGTAAAGC GCAAAACCGC CGCGTCGAAA TTACCTTGAG TCCATTGCAG TAA
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Protein sequence | MKKRVFVIAA IVSGALAVSG CTTNPYTGER EAGKSGIGAG IGSLVGAGIG ALSSSKKDRG KGALIGAAAG AALGGGVGYY MDVQEAKLRD KMRGTGVSVT RSGDNIILNM PNNVTFDSSS ATLKPAGANT LTGVAMVLKE YPKTAVNVVG YTDSTGSHDL NMRLSQQRAD SVASSLITQG VDASRIRTSG MGPANPIASN STAEGKAQNR RVEITLSPLQ
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