Gene SeHA_C3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3963 
Symbol 
ID6491220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3841583 
End bp3842287 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content55% 
IMG OID642744065 
Productputative lipase 
Protein accessionYP_002047670 
Protein GI194451516 
COG category[N] Cell motility 
COG ID[COG5571] Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0770687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTAA GAAAACGCCG TGGTCGCCGG ACATTGCGTT GTCTGGCGGG CCTTATGGCC 
TGCTCGTTTT TTATCAATAC CACATATGCC TGGCAACAAG AATATATCGC TGAAGCGGCT
CCGGGGCATA CGACGGAACG CTATACCTGG GACAGCGATC ACCAACCGAA TTACAACGAC
ATACTGGCCG AACGTATTCA GTCTACGCAA AATACGGTGG GGCCGGTGCT TAGCCTGGCG
GATGAAACCC CGCTTGATGC GACCAGCGGT ATCAGTATGG GCTGGAATTT TCCGCTTTCC
CGACGCGTGA CCACTGGGCC GGTCGCGGCG CTGCATTACG ACGGTTCGAC GTCATCAATG
TATAACGAAT ATGGCGATAG CGCGACGACA TTAGCGTTTA CCGATCCGTT ATGGCACGCC
AGCGTCAGTA CGTTAGGCTG GCGGGTAAAC TCGCAGTTCG GCGATGTCCG TCCCTGGGCG
CAAATCAGCT ATAACCAACA GTTTGGGGAG AATATCTGGA AAGCGCAGTC CGGGTTGAGT
CGTATGACCG CAGGAAATCA GGCGGGAAAC TGGCTGGATG TCACCGTAGG CGCGGACGTG
TTACTTAACC CGCACCTGGC GGCGTATGCG GCGTTTTCCC AGGCGGAAAA TAGCGCTACG
GATAGCGATT ATTTGTATAC CTTGGGGGTG AGCGCCAGGT TTTAA
 
Protein sequence
MIVRKRRGRR TLRCLAGLMA CSFFINTTYA WQQEYIAEAA PGHTTERYTW DSDHQPNYND 
ILAERIQSTQ NTVGPVLSLA DETPLDATSG ISMGWNFPLS RRVTTGPVAA LHYDGSTSSM
YNEYGDSATT LAFTDPLWHA SVSTLGWRVN SQFGDVRPWA QISYNQQFGE NIWKAQSGLS
RMTAGNQAGN WLDVTVGADV LLNPHLAAYA AFSQAENSAT DSDYLYTLGV SARF