Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3963 |
Symbol | |
ID | 6491220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3841583 |
End bp | 3842287 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642744065 |
Product | putative lipase |
Protein accession | YP_002047670 |
Protein GI | 194451516 |
COG category | [N] Cell motility |
COG ID | [COG5571] Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0770687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTAA GAAAACGCCG TGGTCGCCGG ACATTGCGTT GTCTGGCGGG CCTTATGGCC TGCTCGTTTT TTATCAATAC CACATATGCC TGGCAACAAG AATATATCGC TGAAGCGGCT CCGGGGCATA CGACGGAACG CTATACCTGG GACAGCGATC ACCAACCGAA TTACAACGAC ATACTGGCCG AACGTATTCA GTCTACGCAA AATACGGTGG GGCCGGTGCT TAGCCTGGCG GATGAAACCC CGCTTGATGC GACCAGCGGT ATCAGTATGG GCTGGAATTT TCCGCTTTCC CGACGCGTGA CCACTGGGCC GGTCGCGGCG CTGCATTACG ACGGTTCGAC GTCATCAATG TATAACGAAT ATGGCGATAG CGCGACGACA TTAGCGTTTA CCGATCCGTT ATGGCACGCC AGCGTCAGTA CGTTAGGCTG GCGGGTAAAC TCGCAGTTCG GCGATGTCCG TCCCTGGGCG CAAATCAGCT ATAACCAACA GTTTGGGGAG AATATCTGGA AAGCGCAGTC CGGGTTGAGT CGTATGACCG CAGGAAATCA GGCGGGAAAC TGGCTGGATG TCACCGTAGG CGCGGACGTG TTACTTAACC CGCACCTGGC GGCGTATGCG GCGTTTTCCC AGGCGGAAAA TAGCGCTACG GATAGCGATT ATTTGTATAC CTTGGGGGTG AGCGCCAGGT TTTAA
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Protein sequence | MIVRKRRGRR TLRCLAGLMA CSFFINTTYA WQQEYIAEAA PGHTTERYTW DSDHQPNYND ILAERIQSTQ NTVGPVLSLA DETPLDATSG ISMGWNFPLS RRVTTGPVAA LHYDGSTSSM YNEYGDSATT LAFTDPLWHA SVSTLGWRVN SQFGDVRPWA QISYNQQFGE NIWKAQSGLS RMTAGNQAGN WLDVTVGADV LLNPHLAAYA AFSQAENSAT DSDYLYTLGV SARF
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