Gene SeHA_C3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3962 
Symbol 
ID6491214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3840541 
End bp3841065 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID642744064 
Productlong polar fimbria protein A 
Protein accessionYP_002047669 
Protein GI194451794 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG TTGTTTTTGC TCTGTCTGCT CTCGCTGTAG TTTCCACTTC TGCTTTCGCT 
GCTGAATCTG GTGACGGCAC CATTAAATTC ACCGGTGAAA TCGTTGACGC GCCATGCGTC
GTTTCTACTG ACTCCCAGAA CCAGGAAGTT GTGCTGGGTC AGGTTAAGAA AAATATCTTC
AAAGCCATTG GCGACAAGTC TTCTTCTAAG CCTTTCCAGA TCAAACTGGA AGACTGTGAC
ATCACCTCTA ATACCAAAGT TAACGTAAGC TTCAATGGCG TTGGTGATAC AGACGATGCG
ACACTGGTTT CTGTTAACAC TGAAGCAGGT GCGGCAACTG GCGTGGGCAT CGGTATCTAC
GACAACGCTA ACAAGCTTGT TGAAATGAAC ACCGGTAAAT CCACCACTAC GTTGGCTGCT
GGTCAGACCG TGCTGTACTA CACCGCTAAC TACGTTGCAA CAAAAGATAC TGTAACCACT
GGTTACGGTA ACGCAGAAGT GGACTTCAAC CTGTCCTACG AATAA
 
Protein sequence
MKKVVFALSA LAVVSTSAFA AESGDGTIKF TGEIVDAPCV VSTDSQNQEV VLGQVKKNIF 
KAIGDKSSSK PFQIKLEDCD ITSNTKVNVS FNGVGDTDDA TLVSVNTEAG AATGVGIGIY
DNANKLVEMN TGKSTTTLAA GQTVLYYTAN YVATKDTVTT GYGNAEVDFN LSYE