Gene SeHA_C3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3959 
Symbol 
ID6490916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3836110 
End bp3837189 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content47% 
IMG OID 
Productlong polar fimbrial protein 
Protein accessionYP_003495233 
Protein GI291084492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAA AGTTGATAAT GTTTACGGGC CTGTTGGGCG GGTCGGTGCT GTTTTCGGGG 
CAGGCGCTGG CAGCGGCAGA TTTTGGACCA TGTACTCCTG AAGGTGGAAC ACATATCTTC 
AGTGCCACCA TAAATAAAAC AGTTTCAGAT ACGTCAAAGA ACACAACGGG TGCGACCTTC 
GTAGATTTCG ATAGCTGGAA TTTAGGTGGA ACCTATGCGA TGTCCTGTGA ATGCCCTGAT 
GATACCTCTC TTATAAATGA CACCTTATTT AAGGCTGTGG TTCCTCTGGC CTTTGTTACG 
AATATAGAGA GTCGCTCCTA TTACCAGATC AATAATAATA TTGCCATTGC GAGCGATGTA 
CTGATTTCGG GGGGACGAGG AGAATACGTT AACACACCGT TTGAGAATGT AGGTAACCTG 
ACAAACAACC GCTCTCAGTG TTCGCAAAAT GCAAGTAGTA AAGATGCAAT ATGGACATCC 
GGTGGCAAAG GTCACTTATC GCTCTATATT CTCCATCCGT TTGTGGGTGA AAGTATTATA 
CCTAGCACCA AAATAATGGA CCTTTTTGTG ACAAAGAAAC CCAGTGTATA TGGCAGTATA 
CCTGCGTCGT CTGTATATAT CAGTGGTTCA ATTACGGTAC CTCAGGGCTG TGAACTCTCC 
AGCGGCAGCA CGCTGGAAAT TCCGTTTGGG GAATTTAAGG CCACTGATTT TAAAGATCGC 
AAAGGACAAG TTGCAAAGAA CGCCACGAAA TTCACCAAAG AGCTGCAGTT TAAATGCACC 
AATATTTCCG ATGGCGTAAA GATCTTCCTG CGTATTGAGG GAATGCCAAA CGCTAATGAT 
TCGAATGCCA TCGACATGGG CAACCCGGAT ATCGGTGCCG TCATTGAGGG CGCTAACGGT 
AAAATTTTGG TGCCAAATGA CGCCAGTGTT AATCAGGAGC TGAGCGTATC GGGTCTTGTT 
GACGACACGC ACCGTACCGC CTCAACGACC ATTTCGGCTT ACCCTATCAG TACCACCGGC 
AAATTGCCGG CCGCCGGGGA TTTCGAGGGA ATTGCCACCA TGCGTATTGA TGTGGAGTAA
 
Protein sequence
MLKKLIMFTG LLGGSVLFSG QALAAADFGP CTPEGGTHIF SATINKTVSD TSKNTTGATF 
VDFDSWNLGG TYAMSCECPD DTSLINDTLF KAVVPLAFVT NIESRSYYQI NNNIAIASDV 
LISGGRGEYV NTPFENVGNL TNNRSQCSQN ASSKDAIWTS GGKGHLSLYI LHPFVGESII 
PSTKIMDLFV TKKPSVYGSI PASSVYISGS ITVPQGCELS SGSTLEIPFG EFKATDFKDR 
KGQVAKNATK FTKELQFKCT NISDGVKIFL RIEGMPNAND SNAIDMGNPD IGAVIEGANG 
KILVPNDASV NQELSVSGLV DDTHRTASTT ISAYPISTTG KLPAAGDFEG IATMRIDVE