Gene SeHA_C3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3929 
Symbol 
ID6490994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3801680 
End bp3803167 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content54% 
IMG OID642744035 
Producthypothetical protein 
Protein accessionYP_002047641 
Protein GI194450275 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0881778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGCA CAAAAATTCG ACTCTTAGCG GGCAGTCTGT TGATGTTGGC CTCTGCCGGC 
TATGTGCAGG CAGATGCGCT CCAGCCCGAT CCGGCATGGC AACAGGGGAC GCTGGCTAAT 
GGGTTACAGT GGCAAGTGTT GGCTACGCCT CAGCGCCCCA GCGATCGTAT TGAAGTTCGT 
CTCCAGGTTA ATACCGGTTC GCTCACCGAA AGTACGCAAC AGAGCGGGTT CAGCCATGCG 
ATTCCCCGTA TCGCGCTGAC GCAAAGCGGT GGTCTGGATG CCGCACAGGC ACGTTCTTTA 
TGGCAGCAAG GGTTTGATCC GAAACGTCCC ATGCCGCCCG TTATTGTTTC TTATGATTCC 
ACGCTCTATA ACCTCAGTTT ACCCAATAAC CGTAACGATC TGCTGAAAGA AGCGCTGACC 
TATCTGGCTA ACGTCTCCGG TAAATTAACC ATTACGCCAG AGACGGTGAA TCATGCGTTA 
AGCAGCGAAG ATATGGTTGC GACGTGGCCA GCAGATACTA AAGAGGGCTG GTGGCGTTAT 
CGGCTGAAAG GGTCGGCGTT ATTGGGGCAC GATCCCGCGG AACCGTTAAA GCAGCCGGTA 
GACGCAGCCA AAATTCAGGC TTTCTATGAA AAATGGTACA CCCCGGATGC CATGACGCTG 
ATTGTTGTCG GCAACATTGA TGCGCGCTCC GTCGCCGAGC AGATCAATAA AACGTTCGGT 
ACGCTGAAAG GTAAACGCGA AACGCCCGCC CCGGTGCCGA CGCTTTCGCC GCTGCGGGCG 
GAATCAGTGA GCATTATGAC CGATGCGGTG CGCCAGGATC GTCTCTCCAT TATGTGGGAT 
ACGCCGTGGC AACCGATTCG CGAGTCGGCG GCGCTGTTGC GCTACTGGCA GGCGGATCTG 
GCGCGCGAAG CGCTGTTCTG GCATATCCAG CAAGAGCTTA CTAAAAATAA CGCGAAAGAT 
ATTGGTCTGG GGTTTGACTG CCGGGTTCTG TTTCTGCGCG CGCAGTGCGC CATCAACATT 
GAATCACCTA ATGATAAGCT CAATACCAAT TTGAGCCTGG TGGCGAATGA ACTGGCGAAA 
GTACGCGATA AAGGTTTGTC GGAAGAGGAG TTTACTGCGC TGGTGGCGCA GAAAAATCTC 
GAATTGCAAA AGCTGTTCGC GACCTACGCG CGTACCGATA CTGACATTTT GACTGGACAG 
CGTATGCGCT CGCTGCAGAA TCAGGTGGTG GATATCGCGC CGGAGCAGTA TCAGAAGCTG 
CGTCAGAATT TCCTCAACAG CCTGACCGTT GATATGCTCA ATCAGAATTT ACGTCAGCAG 
CTATCGCAGG AGATGGCATT AATTTTGCTG CAACCGCAAG GCGAGCCGGA ATTTAATATG 
AAGGCGTTAA AGGCGACGTG GGATGAAATC ATGGTCCCGA CAACTGCCGC CGCTGTTGAA 
GCAGATGAGG CGCATCCGGA AGTGACGGAG ACACCGGCGG CACAGTAA
 
Protein sequence
MQGTKIRLLA GSLLMLASAG YVQADALQPD PAWQQGTLAN GLQWQVLATP QRPSDRIEVR 
LQVNTGSLTE STQQSGFSHA IPRIALTQSG GLDAAQARSL WQQGFDPKRP MPPVIVSYDS 
TLYNLSLPNN RNDLLKEALT YLANVSGKLT ITPETVNHAL SSEDMVATWP ADTKEGWWRY 
RLKGSALLGH DPAEPLKQPV DAAKIQAFYE KWYTPDAMTL IVVGNIDARS VAEQINKTFG 
TLKGKRETPA PVPTLSPLRA ESVSIMTDAV RQDRLSIMWD TPWQPIRESA ALLRYWQADL 
AREALFWHIQ QELTKNNAKD IGLGFDCRVL FLRAQCAINI ESPNDKLNTN LSLVANELAK 
VRDKGLSEEE FTALVAQKNL ELQKLFATYA RTDTDILTGQ RMRSLQNQVV DIAPEQYQKL 
RQNFLNSLTV DMLNQNLRQQ LSQEMALILL QPQGEPEFNM KALKATWDEI MVPTTAAAVE 
ADEAHPEVTE TPAAQ