| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3926 |
|---|
| Symbol | |
|---|
| ID | 6490828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3797531 |
|---|
| End bp | 3799591 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642744033 |
|---|
| Product | AsmA family protein |
|---|
| Protein accession | YP_002047639 |
|---|
| Protein GI | 194449561 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 94 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAG CAGGCAAAAT AACCGCCGCC ATCACAGGGA CTTTCTTGTT GTTGATCGCC
ATAGTGATTT TGTTGATCGC AACATTTGAC TGGAACCGCC TCAAACCGAC CATCAACCAG
AAAGTCTCTA CCGAATTGAA CCGGCCTTTC GCTATTCGCG GCGATTTAGG CGTGGTGTGG
GAACGCCAAA AACAGGAGAC CGGCTGGCGA AGCTGGGTAC CGTGGCCGCA TGTTCACGCG
GAAGACGTCA TTCTCGGCAA TCCGCCGGAT ATTCCGGAAG TTACGATGGT GCATCTGCCA
CGCGTTGAGG CGACGCTTGC CCCGCTGGCG CTCCTGACCA AAACCGTCTG GCTGCCGTGG
ATCAAACTGG TGAAACCCGA CGCGCGTCTT ATTCGTCTGT CCGAGAAAAC CAATAACTGG
ACCTTTAACC TCACGCAAGA CAAGAATACG GACCCCAATG CTAAACCTTC CGCCTGGTCC
TTCCGGCTGG ATAATATTCT CTTCGACCAG GGGCGAATCG CGATCGATGA TAAGGTCAGT
AAAGCGGATA TCACTATTCT GGTCGATCCG TTAGGCAAAC CGTTGCCGTT CAGCGAAGTG
ACGGGAACGA AAGGCAAAGC AGACAAATCC ACCGTGGGCG ACTATGTCTT CGGCCTGAAG
GCGCAGGGGC GTTATAACGG GGAACCGTTG ACCGGTACGG GGAAAATAGG CGGTATGCTG
GCGCTACGCA GCGAAAGTAC GCCTTTTCCT GTGCAGGCCG ATTTCCGCTC TGGTAATACG
CGGGTGGCTT TTAGCGGCGT GGTGAACGAA CCGATGAAAA TGGGCGGCGT CGATCTGCGG
CTTAAATTCT CTGGCGATTC ACTGGGCGAT TTATATGATT TAACCGGCGT GCTGCTGCCG
GATACGCCGC CGTTTGAGAC CGATGGGCGA TTGGTGGCGA AAATTGACGC CGAAAAGTCA
TCAGTATTTG ATTATCGCGG TTTTAACGGG CGCATTGGCG ACAGTGATAT CCACGGCTCC
CTCACTTATA CCACCGGTAA ACCGCGCCCT AAACTGGAAG GCGATGTCGA ATCGCGCCAG
TTACGCCTGG CCGATCTTGG GCCGCTGATT GGCGTGGATT CCGGGAAAGA CGCTGAGCAG
TCGAAACGGT CTGAACAGCG CAAAGGCGAG AAGAATGTTC AGCCGGCGGA TAAAGTGTTG
CCTTACGATC GCTTTGAAAC CGACAAATGG GACGTTATGG ACGCCGATGT CCGGTTTAAA
GGCCGACGTA TTGAACATGG CGGCAGTCTA CCGATTAGCG ATCTTTCGAC CCATATCATC
CTGAAAAACG CCGACTTACG TCTACAGCCG CTGAAGTTTG GTCTGGCAGG CGGCAGTATT
GTCTCCAACA TCCATCTGGA AGGGGATAAA AAGCCAATGC AGGGGCGGGC GGATATACAG
GCGCGTCGGC TGAAGCTTAA AGAACTGATG CCGGATGTGG AGCTGATGCA GAAAACGCTG
GGCGAGCTGA ACGGCGATGC GGATATTCGC GGGACGGGCA ACTCGGTCGC CGCGCTGCTT
GGCAACAGTA ACGGCAATCT CAAATTATTG ATGAATGATG GATTGATTAG CCGCAACCTG
ATGGAAATCG TGGGGCTGAA CGTCGGCAAC TATATTGTCG GGCAGATTTT TGGCGATGAC
GAAGTGCGGG TTAACTGCGC GGCGGCGAAT CTCAATATTG CGAACGGCGT GGCGCGACCG
CAAATTTTTG CTTTTGATAC AGAAAATGCG TTGATTAACG TGACCGGTAC GGCGAGCTTC
GCCTCTGAAC AGCTCGATTT AACCATTGAT CCGGAAAGTA AGGGGATTCG TATTATTACG
CTGCGATCGC CGCTGTACGT GCGCGGGACA TTTAAAAATC CGCAGGCGGG CGTCAAGCCC
GGCCCGCTGA TTGCGCGCGG CGCGGTTGCG GCAGCGCTGG CGACGTTGGT AACGCCCGCC
GCCGCGCTAT TGGCGCTCAT TTCGCCCTCT GAAGGCGAAG CCAATCAGTG CCGGACGATT
TTAACGCAGA TGAAGCAGTA A
|
|---|
| Protein sequence | MTKAGKITAA ITGTFLLLIA IVILLIATFD WNRLKPTINQ KVSTELNRPF AIRGDLGVVW
ERQKQETGWR SWVPWPHVHA EDVILGNPPD IPEVTMVHLP RVEATLAPLA LLTKTVWLPW
IKLVKPDARL IRLSEKTNNW TFNLTQDKNT DPNAKPSAWS FRLDNILFDQ GRIAIDDKVS
KADITILVDP LGKPLPFSEV TGTKGKADKS TVGDYVFGLK AQGRYNGEPL TGTGKIGGML
ALRSESTPFP VQADFRSGNT RVAFSGVVNE PMKMGGVDLR LKFSGDSLGD LYDLTGVLLP
DTPPFETDGR LVAKIDAEKS SVFDYRGFNG RIGDSDIHGS LTYTTGKPRP KLEGDVESRQ
LRLADLGPLI GVDSGKDAEQ SKRSEQRKGE KNVQPADKVL PYDRFETDKW DVMDADVRFK
GRRIEHGGSL PISDLSTHII LKNADLRLQP LKFGLAGGSI VSNIHLEGDK KPMQGRADIQ
ARRLKLKELM PDVELMQKTL GELNGDADIR GTGNSVAALL GNSNGNLKLL MNDGLISRNL
MEIVGLNVGN YIVGQIFGDD EVRVNCAAAN LNIANGVARP QIFAFDTENA LINVTGTASF
ASEQLDLTID PESKGIRIIT LRSPLYVRGT FKNPQAGVKP GPLIARGAVA AALATLVTPA
AALLALISPS EGEANQCRTI LTQMKQ
|
|---|
| |