Gene SeHA_C3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3923 
Symbol 
ID6489992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp3793815 
End bp3794717 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content54% 
IMG OID642744030 
ProductLysR substrate binding domain-containing protein 
Protein accessionYP_002047636 
Protein GI194448392 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATA AAATATATGC AATGAAATTG TTTGTACGCG TGGCGGAACG GGAAAGTTTT 
TCCCGTGCAG CAGAGGATAT CGGCCTTCCC AAAGGCAGCG TCTCACGGCA AATACAAGCG 
TTAGAACATC AACTGGGCAT CCGCCTGCTC CACCGCACCA CCCGGCGGGT ACAGCTTACT 
CAGGACGGAA TGGTTTACTA CGAACGGGCA AAAGATCTGT TGAGTAACCT GGATGAACTG 
GAGGGTCTTT TCCAGCCTGA TCCCGCCAGT ATCAGCGGCA AAATACGGGT AGATATACCG 
CCATGTCTCG CAAACAGCCT TATCATGCCG CGCCTGCCCA CTTTTTTGCA TCAGTATCCC 
GGCATTGCGC TGGAACTTTG TAGTAGCGAT CGACAGGTCG ATTTACTACG GGAAGATTTC 
GACTGTGTGG TGCGTACAGA GCCGCTACAT GCGCCGGGGA TACTGACGCG CCCGCTTGGC 
AAACTGAGAA GGGTGAACTG CGCCAGCCCA CAATACCTGG CGCGCTTTGG GTATCCAGAA 
AACCTTGACG ACCTCGCCTC ACATGCGATG GTGCATTATT CATTGACCCC GGGAGTCTCT 
TCACCGGGTT TTGCCTTCGA AACGCCCCAC GGTATGCAGT GGGTAAAAAC CGGCGGAATG 
CTAACGGTAA ACAGTACGGA GACCTGGCAT ACGGCCTGTC TGGCAGGATT AGGGATCATT 
CAGACGCCGC GCATTGCTGT ACGGGAGGCG TTACGCGCCG GAACGCTCAT TGAAATTTTA 
CCGCAATATC GCGCCGCTCC ACTGCCGGTG ACGCTGCATT ATCCCCATCG CCGTAATCTT 
TCCCGCCGGG TACACCTGTT TATGGTATGG CTGACTGAAA CCATTAAAGA GGCCGCAGAG 
TAG
 
Protein sequence
MMDKIYAMKL FVRVAERESF SRAAEDIGLP KGSVSRQIQA LEHQLGIRLL HRTTRRVQLT 
QDGMVYYERA KDLLSNLDEL EGLFQPDPAS ISGKIRVDIP PCLANSLIMP RLPTFLHQYP 
GIALELCSSD RQVDLLREDF DCVVRTEPLH APGILTRPLG KLRRVNCASP QYLARFGYPE 
NLDDLASHAM VHYSLTPGVS SPGFAFETPH GMQWVKTGGM LTVNSTETWH TACLAGLGII 
QTPRIAVREA LRAGTLIEIL PQYRAAPLPV TLHYPHRRNL SRRVHLFMVW LTETIKEAAE