Gene SeHA_C3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3897 
Symbol 
ID6491426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3764948 
End bp3766072 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content54% 
IMG OID642744004 
ProductABC transporter ATP-binding protein 
Protein accessionYP_002047610 
Protein GI194447390 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGAT TACGTAATAT TTATAACCTC GGCGTTAAAG AACTGCGCAG TCTGCTGGGC 
GACAAAGCGA TGCTGGCGCT GATCGTCTTC GCCTTTACGA TTTCGGTTTA CTCCTCCGCT
ACCGTCCTGC CCGGTTCGTT GCATCTTGCC CCTATCGCCA TCGCCGATAT GGATCAGTCG
CAGTTGTCGA ACCGTATTGT GAATAGTTTT TACCGCCCGT GGTTTCTGCC GCCGGAGATG
ATTACGGCAA CGGAAATGGA TGCCGGACTG GATGCCGGAC GCTATACCTT TGCGGTCAAT
ATTCCGCCGA ATTTCCAGCG TGATGTGCTG GCCGGACGTC AGCCTGATAT TCAGGTTAAC
GTCGATGCGA CGCGCATGAG CCAGGCGTTT ACCGGCAACA GTTATATCCA GAATATTATT
AGCGGCGAGG TCAACAGCTT TGTGGCGCGC GCGCGGGGAG ATAACGTTCA GCCGGTGTCG
CTGGAGATTC GGATGCGCTT TAACCCAAAT CTGGACCCGG CGTGGTTTGG CGGCGTGATG
GCGATTATCA ACAACATTAC CATGCTGGCA ATAGTGCTGA CCGGATCGGC GCTGATCCGC
GAGCGAGAAC ACGGCACGGT AGAGCATCTG TTGGTGATGC CGGTCACGCC CTTTGAGATC
ATGATGGCAA AAGTGTGGTC GATGGGGCTG GTCGTGCTGG TGGTTTCCGG TTTGTCTTTG
ATGCTGATGG TGAAAGGCGT ACTTGGCGTA CCGATTGAAG GATCGATCCC ATTGTTTATG
TTGGGCGTGG TGCTGAGCCT GTTCGCCACC ACTTCAATTG GGATTTTTAT GGGCACCATC
GCCCGTTCGA TGCCGCAACT GGGGTTATTA ATGATTCTGG TACTGTTACC GCTACAAATG
CTTTCCGGCG GTTCCACGCC GCGCGAAAGT ATGCCGCAGG CGGTGCAGGA TATTATGCTG
ACCATGCCGA CGACGCATTT TGTCAGCCTT GCCCAGGCTA TTCTTTATCG CGGCGCAGGT
TTGAGTATCG TCTGGCCGCA GTTCCTGACC CTGCTGGCGA TAGGCGGCGT GTTCTTCCTG
ATAGCGCTGT TACGCTTCAG AAAAACGATT GGCACAATGG CGTAA
 
Protein sequence
MRGLRNIYNL GVKELRSLLG DKAMLALIVF AFTISVYSSA TVLPGSLHLA PIAIADMDQS 
QLSNRIVNSF YRPWFLPPEM ITATEMDAGL DAGRYTFAVN IPPNFQRDVL AGRQPDIQVN
VDATRMSQAF TGNSYIQNII SGEVNSFVAR ARGDNVQPVS LEIRMRFNPN LDPAWFGGVM
AIINNITMLA IVLTGSALIR EREHGTVEHL LVMPVTPFEI MMAKVWSMGL VVLVVSGLSL
MLMVKGVLGV PIEGSIPLFM LGVVLSLFAT TSIGIFMGTI ARSMPQLGLL MILVLLPLQM
LSGGSTPRES MPQAVQDIML TMPTTHFVSL AQAILYRGAG LSIVWPQFLT LLAIGGVFFL
IALLRFRKTI GTMA