Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3874 |
Symbol | livM |
ID | 6490763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3743234 |
End bp | 3744511 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642743981 |
Product | leucine/isoleucine/valine transporter permease subunit |
Protein accession | YP_002047587 |
Protein GI | 194450660 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.212137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGA TGCATATTGC GATGGCTCTG TTCTCTGCGG CGATGTTCTT CGTTTTGGCT GGCGTCTTCA TGGGCGTACA ACTGGAGCTG GACGGCACCA AACTGGTGGT GGATACCGCC GCCGACATCC GCTGGCAGTG GATCTTTATC GGTACGGCAG TGGTTTTTTT CTTTCAGTTA CTGCGTCCGA TGTTCCAGAA AGCGGTGAAG CACGTCTCCG GACCGAAGTT TATTCTGCCG GCGATCGATG GCTCTACCGT TAAGCAAAAG CTGTTTCTGA TGGCGCTGCT GGTTATCGCC GTGGCATGGC CGTTTATGGT GTCGCGCGGT AGCGTCGATA TCGCCACCAT GACCATGATT TATATCATCC TCGGTCTGGG GCTGAACGTG GTGGTGGGGC TGTCCGGTCT GCTGGTATTG GGCTACGGCG GCTTTTACGC CATCGGCGCT TATACCTTTG CGCTGCTCAA CCACTATTAT GGTTTGGGTT TCTGGACCTG CCTGCCGCTG GCGGGACTGG TCTCCGCCGC TGCTGGTTTC CTGCTCGGCT TCCCGGTACT GCGTCTGCGC GGCGACTATC TGGCGATTGT GACGCTCGGC TTCGGCGAAA TCGTCCGTAT CCTGCTGCTC AACAACACGG AAATTACCGG CGGCCCGAAC GGTATCAGCC AGATCCCCAA ACCGACGCTA TTTGGTCTGG AGTTTAGCCG CAACACCCGA GAAGGCGGCT GGGATACCTT CAGCAATTTC TTTGGCGTGA AGTACGACCC ATCCGACCGG GTCATTTTCC TCTATCTGGT GGCCCTGTTG CTGGTGGTCC TGTCGCTGTT TGTCATTAAC CGCCTGCTGC GTATGCCGCT GGGCCGGGCG TGGGAAGCGT TGCGTGAAGA TGAGATCGCC TGTCGCTCAT TAGGTTTAAG CCCGACGCGC ATCAAGCTGA CCGCTTTTAC TATCAGCGCC GCGTTTGCCG GTTTCGCCGG GACGTTGTTT GCCGCCCGCC AGGGCTTTGT CAGCCCGGAA TCCTTCACCT TCGCCGAATC CGCCTTCGTG CTGGCGATTG TGGTGCTGGG CGGAATGGGC TCGCAGTTTG CGGTGATCCT GGCGGCGGTT CTGTTGGTGG TGTCGCGCGA GTTGATGCGC GATTTCAACG AATACAGCAT GTTGATGCTC GGCGGTTTGA TGGTGTTGAT GATGATCTGG CGCCCGCAGG GATTGCTGCC GATGACGCGT CCGCAGTTGA AGCTGAAAAG TGGTCAGGCG AAAGGAGAGC AGGCATGA
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Protein sequence | MKPMHIAMAL FSAAMFFVLA GVFMGVQLEL DGTKLVVDTA ADIRWQWIFI GTAVVFFFQL LRPMFQKAVK HVSGPKFILP AIDGSTVKQK LFLMALLVIA VAWPFMVSRG SVDIATMTMI YIILGLGLNV VVGLSGLLVL GYGGFYAIGA YTFALLNHYY GLGFWTCLPL AGLVSAAAGF LLGFPVLRLR GDYLAIVTLG FGEIVRILLL NNTEITGGPN GISQIPKPTL FGLEFSRNTR EGGWDTFSNF FGVKYDPSDR VIFLYLVALL LVVLSLFVIN RLLRMPLGRA WEALREDEIA CRSLGLSPTR IKLTAFTISA AFAGFAGTLF AARQGFVSPE SFTFAESAFV LAIVVLGGMG SQFAVILAAV LLVVSRELMR DFNEYSMLML GGLMVLMMIW RPQGLLPMTR PQLKLKSGQA KGEQA
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