Gene SeHA_C3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3868 
SymbolugpA 
ID6492228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3738813 
End bp3739700 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content56% 
IMG OID642743975 
Productglycerol-3-phosphate transporter permease 
Protein accessionYP_002047581 
Protein GI194451003 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAT CCCGTCCGGT GTTCCGCTCG CGCTGGCTGC CGTATTTACT GGTTGCCCCG 
CAGTTGGTTA TCACCGTTAT TTTCTTTATC TGGCCTGCGG GCGAAGCGCT GTGGTATTCG
CTGCAAAGCG TCGATCCGTT TGGTTTTTCC AGCCAATTTG TCGGGCTGGA GAATTTTGTC
GCGCTTTTTC ACGACAGTTA TTATCTCGAC GCCTTCTGGA CGACGATTAA ATTCAGCGCG
CTGGTCACGT TTAGCGGCCT GCTGGTCTCG CTGTTTTTCG CCGCCCTGGT GGATTACGTG
GTGCGCGGCA GCCGTTTTTA TCAGACGCTG ATGCTGCTGC CTTATGCCGT CGCGCCCGCC
GTCGCCGCCG TATTGTGGAT TTTCCTGTTT AACCCAGGGC GGGGATTAAT CACCCATTTC
CTCGGCGAAT TCGGCTATGA CTGGAACCAC GCGCAAAACA GCGGTCAGGC GATGTTCCTG
GTGGTATTTG CGTCAGTCTG GAAGCAGATT AGTTACAACT TTTTATTCTT CTTTGCCGCG
CTGCAATCCA TTCCCCGCTC GCTGGTGGAA GCGGCGGCCA TTGACGGCGC CGGGCCGATT
CGTCGTTTCT TCCGGCTTTC TTTGCCGCTT ATTGCGCCGG TCAGTTTCTT CCTGCTGGTG
GTCAACCTGG TGTATGCCTT TTTCGACACC TTCCCGGTGA TCGACGCCGC GACCGCCGGC
GGGCCGGTAC AAGCCACCAC GACGCTGATT TATAAGATCT ATCGCGAAGG GTTTACCGGC
CTGGATCTCT CGGCGTCCGC CGCGCAGTCG GTGGTGTTGA TGTTCCTCGT CATCATTTTG
ACGGTGGTGC AGTTCCGCTA TGTGGAAAGT AAGGTGCGTT ACCAATGA
 
Protein sequence
MSSSRPVFRS RWLPYLLVAP QLVITVIFFI WPAGEALWYS LQSVDPFGFS SQFVGLENFV 
ALFHDSYYLD AFWTTIKFSA LVTFSGLLVS LFFAALVDYV VRGSRFYQTL MLLPYAVAPA
VAAVLWIFLF NPGRGLITHF LGEFGYDWNH AQNSGQAMFL VVFASVWKQI SYNFLFFFAA
LQSIPRSLVE AAAIDGAGPI RRFFRLSLPL IAPVSFFLLV VNLVYAFFDT FPVIDAATAG
GPVQATTTLI YKIYREGFTG LDLSASAAQS VVLMFLVIIL TVVQFRYVES KVRYQ