| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3832 |
|---|
| Symbol | |
|---|
| ID | 6489972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3700703 |
|---|
| End bp | 3701533 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642743942 |
|---|
| Product | intramembrane serine protease GlpG |
|---|
| Protein accession | YP_002047548 |
|---|
| Protein GI | 194450831 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 0.555662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATGA TTACTTCCTT TGCGAATCCT CGCGTGGCGC AGGCATTTGT TGATTACATG
GCCACCCAGG GCGTCATTCT TACTATTCAG CAACATAATC AAAGCGATAT CTGGTTGGCA
GATGAATCGC AGGCCGAACG TGTGCGGGGC GAGCTGGCGC GGTTTATAGA AAATCCCGGC
GATCCGCGTT ATCTGGCGGC TAGCTGGCAG TCCGGGCAGA CTAACAGCGG GCTACGCTAT
CGCCGTTTTC CCTTTCTCGC CACGCTGCGT GAACGAGCCG GCCCTGTTAC CTGGATCGTG
ATGCTCGCCT GCGTGCTGGT CTATATCGCG ATGAGTCTCA TCGGCGATCA GACGGTGATG
GTGTGGCTGG CGTGGCCGTT CGATCCGGTT TTAAAATTTG AAGTCTGGCG CTACTTCACC
CATATCTTTA TGCACTTCTC ACTGATGCAT ATTCTTTTTA ACCTGCTGTG GTGGTGGTAT
CTCGGCGGGG CGGTAGAGAA GCGCCTGGGC AGCGGTAAAT TAATCGTCAT TACGGTGATA
AGCGCGCTGC TAAGCGGCTA TGTACAGCAG AAATTTAGCG GCCCGTGGTT TGGCGGACTG
TCTGGCGTCG TCTATGCGCT GATGGGTTAC GTGTGGCTGC GTGGAGAGCG CGATCCGCAA
AGCGGAATTT ACCTCCAGCG CGGCTTAATT ATTTTTGCAT TATTGTGGAT AGTCGCTGGT
TGGTTTGACT GGTTTGGCAT GTCTATGGCG AACGGCGCGC ACATCGCCGG GCTTATCGTC
GGTTTAGCGA TGGCCTTTGT TGATACGCTG AATGCGCGAA AACGAACGTG A
|
|---|
| Protein sequence | MLMITSFANP RVAQAFVDYM ATQGVILTIQ QHNQSDIWLA DESQAERVRG ELARFIENPG
DPRYLAASWQ SGQTNSGLRY RRFPFLATLR ERAGPVTWIV MLACVLVYIA MSLIGDQTVM
VWLAWPFDPV LKFEVWRYFT HIFMHFSLMH ILFNLLWWWY LGGAVEKRLG SGKLIVITVI
SALLSGYVQQ KFSGPWFGGL SGVVYALMGY VWLRGERDPQ SGIYLQRGLI IFALLWIVAG
WFDWFGMSMA NGAHIAGLIV GLAMAFVDTL NARKRT
|
|---|
| |