Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3807 |
Symbol | pckA |
ID | 6492179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 3670124 |
End bp | 3671743 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642743918 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_002047524 |
Protein GI | 194449226 |
COG category | [C] Energy production and conversion |
COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTTA ACAATTTAAC CCCGCAAGAT CTCAAGGCTT ATGGTATCAA CGACGTCCAG GATATCGTTT ACAATCCCAG CTACGACACC CTTTATCAGG AAGAACTTAA TCCTGGTCTG GAAGGCTATG AGCGTGGCGT GTTAACTAAC CTGGGCGCTG TTGCCGTTGA TACCGGTATT TTTACCGGTC GTTCGCCTAA GGATAAGTAT ATTGTTCGCG ACGACACCAC GCGTGATACG CTGTGGTGGT CCGATAAGGG TAAAGGTAAA AACGATAATA AGCCGCTTTC CCAGGAAACC TGGCAACACC TGAAAGGTCT GGTGACGCAT CAGCTTTCCG GTAAACGCTT ATTCATTGTT GATGCGTTCT GCGGCGCAAA TGCCGATACG CGTCTTTCCG TGCGCTTTAT TACGGAAGTC GCCTGGCAGG CCCACTTCGT TAAAAATATG TTCATTCGCC CAACGGACGA AGAGCTGGTA GGCTTCAAAC CTGACTTTAT TGTCATGAAC GGCGCGAAGT GCACCAACCC GCAGTGGAAA GAGCAAGGAC TGAACTCGGA AAACTTCGTG GCGTTCAACC TGACTGAACG TATTCAGCTT ATTGGCGGCA CCTGGTACGG CGGCGAAATG AAAAAAGGGA TGTTCTCGGT AATGAACTAC CTGCTGCCGC TCAAAGGTAT CGCCTCAATG CACTGTTCCG CCAACGTGGG TGAAAAAGGC GATGTCGCGG TCTTCTTCGG CCTTTCCGGT ACCGGAAAAA CCACTCTCTC CACCGACCCG AAACGTCGTC TGATTGGCGA TGATGAGCAC GGTTGGGATG ACGACGGCGT GTTCAATTTT GAAGGCGGCT GCTACGCCAA AACCATCAAA CTGTCGAAAG AAGCGGAGCC AGAAATTTAT CATGCGATTC GCCGTGATGC GCTGCTGGAA AACGTCACCG TGCGCGAAGA CGGCACCGTT GATTTCGACG ATGGTTCCAA AACCGAAAAC ACCCGCGTCT CTTACCCGAT CTATCATATC GATAACATCG TTAAGCCCGT GTCCAAAGCA GGTCACGCCA CCAAGGTTAT CTTCCTGACG GCGGACGCCT TCGGCGTGTT GCCGCCGGTT TCCCGTTTAA CCGCTAACCA GACGCAGTAC CACTTCCTGT CAGGTTTCAC CGCTAAACTG GCCGGCACCG AACGCGGCGT CACCGAACCG ACCCCCACCT TCTCCGCCTG CTTCGGCGCC GCGTTCCTGA CGCTGCACCC AACGCAGTAT GCTGAGGTGC TGGTGAAACG TATGCAGGCA GCAGGCGCGC AGGCTTATCT GGTTAACACC GGCTGGAATG GCACCGGCAA ACGTATCTCC ATCAAAGATA CGCGCGCAAT TATCGACGCC ATTCTGAACG GTTCTCTTGA TAACGCGGAA ACCTTCCGTC TGCCGCTGTT CGATCTGGCG ATCCCGACTG AACTGCCAGG CGTGGATACC CACATTCTCG ACCCGCGTAA CACCTACGCG TCGCCGGAAC AATGGCAGGA AAAAGCCACC GCGCTGGCGA AACTGTTCAT TGAGAACTTC GAGAAGTATA CGGATACCCC GGCAGGCGAA GCGCTGGTTA GCGCCGGACC GAAGCTGTAA
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Protein sequence | MRVNNLTPQD LKAYGINDVQ DIVYNPSYDT LYQEELNPGL EGYERGVLTN LGAVAVDTGI FTGRSPKDKY IVRDDTTRDT LWWSDKGKGK NDNKPLSQET WQHLKGLVTH QLSGKRLFIV DAFCGANADT RLSVRFITEV AWQAHFVKNM FIRPTDEELV GFKPDFIVMN GAKCTNPQWK EQGLNSENFV AFNLTERIQL IGGTWYGGEM KKGMFSVMNY LLPLKGIASM HCSANVGEKG DVAVFFGLSG TGKTTLSTDP KRRLIGDDEH GWDDDGVFNF EGGCYAKTIK LSKEAEPEIY HAIRRDALLE NVTVREDGTV DFDDGSKTEN TRVSYPIYHI DNIVKPVSKA GHATKVIFLT ADAFGVLPPV SRLTANQTQY HFLSGFTAKL AGTERGVTEP TPTFSACFGA AFLTLHPTQY AEVLVKRMQA AGAQAYLVNT GWNGTGKRIS IKDTRAIIDA ILNGSLDNAE TFRLPLFDLA IPTELPGVDT HILDPRNTYA SPEQWQEKAT ALAKLFIENF EKYTDTPAGE ALVSAGPKL
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