Gene SeHA_C3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3793 
SymbolaroK 
ID6491152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3655786 
End bp3656307 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content51% 
IMG OID642743905 
Productshikimate kinase I 
Protein accessionYP_002047511 
Protein GI194448072 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.013782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA AACGCAATAT CTTTCTGGTT GGGCCTATGG GTGCCGGAAA AAGCACTATT 
GGGCGCCAGT TAGCTCAACA ACTCAATATG GAATTTTACG ATTCTGATCA AGAGATTGAG 
AAACGAACCG GAGCTGATGT GGGCTGGGTC TTCGATGTTG AAGGTGAAGA CGGCTTCCGT 
AATCGTGAAG AAAAAGTTAT CAACGAATTG ACGGAAAAAC AGGGTATTGT GCTGGCAACC 
GGCGGTGGCT CTGTAAAATC GCGTGAAACG CGTAACCGTC TCTCCGCGCG TGGCGTCGTG 
GTCTACCTTG AAACGACCAT CGAAAAACAA CTGGCGCGCA CGCAGCGTGA TAAAAAACGC 
CCGCTGTTGC AGGTTGAAGC GCCGCCTCGC GAAGTTCTGG AAGCGCTGGC TAACGAACGC 
AATCCGCTGT ACGAAGAGAT TGCCGACGTC ACCATTCGCA CCGACGATCA AAGCGCTAAG 
GTTGTGGCAA ACCAGATTAT TCATATGCTG GAAAGCAACT AA
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRQLAQQLNM EFYDSDQEIE KRTGADVGWV FDVEGEDGFR 
NREEKVINEL TEKQGIVLAT GGGSVKSRET RNRLSARGVV VYLETTIEKQ LARTQRDKKR 
PLLQVEAPPR EVLEALANER NPLYEEIADV TIRTDDQSAK VVANQIIHML ESN