Gene SeHA_C3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3788 
Symbolgph 
ID6492406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3650803 
End bp3651561 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID642743900 
Productphosphoglycolate phosphatase 
Protein accessionYP_002047506 
Protein GI194451926 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGT TACAGAATAT TCGGGGCGTC GCCTTTGATC TTGACGGTAC GCTGGTGGAT 
AGCGCGCCGG GTCTTGCCGC GGCGGTGGAT ATGGCGCTGT ATGCGCTGGA ACTGCCGGTC
GCGGGCGAGG AGCGCGTAAT TACCTGGATT GGTAACGGCG CAGACGTATT GATGGAACGC
GCGCTGACCT GGGCTCGCCA AGAGCGCGCC ACGCTGCGTA AGACGATGGG GAAACCGCCC
GTTGATGAAG ATATTCCTGC CGAGGAACAG GTACGTATTC TGCGTAAACT GTTCGACAGG
TATTATGGCG AAGTGGCGGA AGAAGGCACT TTTTTATTTC CGCATGTCGC CGACACGCTG
GGCGCGCTGC ACGCCAGCGG ATTGTCATTA GGTCTGGTGA CGAATAAGCC GACGCCGTTC
GTCGCGCCGT TGCTGGAATC GCTTGATATC GCCAAATACT TTGGTGTGGT TATCGGCGGC
GATGATGTGC AAAATAAGAA GCCGCATCCG GAGCCGCTGT TGCTGGTGGC AAGCCGGCTG
GGCATGATGC CGGAGCAGAT GCTTTTTGTC GGCGATTCGC GTAATGATAT TCAGGCTGCA
AAAGCGGCAG GCTGCCCTTC GGTTGGCCTG ACATACGGCT ACAATTATGG CGAAGCGATC
GCCCTTAGCG AGCCGGACGT CATTTATGAC AGTTTTAACG ACCTTTTGCC CGCACTTGGG
CTTCCGCATA GCGATAACCA GGAAATAAAA AATGACTAA
 
Protein sequence
MDKLQNIRGV AFDLDGTLVD SAPGLAAAVD MALYALELPV AGEERVITWI GNGADVLMER 
ALTWARQERA TLRKTMGKPP VDEDIPAEEQ VRILRKLFDR YYGEVAEEGT FLFPHVADTL
GALHASGLSL GLVTNKPTPF VAPLLESLDI AKYFGVVIGG DDVQNKKPHP EPLLLVASRL
GMMPEQMLFV GDSRNDIQAA KAAGCPSVGL TYGYNYGEAI ALSEPDVIYD SFNDLLPALG
LPHSDNQEIK ND