| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3785 |
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| Symbol | |
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| ID | 6492056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 3643473 |
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| End bp | 3649298 |
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| Gene Length | 5826 bp |
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| Protein Length | 1941 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642743897 |
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| Product | porin autotransporter |
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| Protein accession | YP_002047503 |
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| Protein GI | 194448727 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA AAAAACTTAT TTCTATCGCT ATCGCTTTAA CGCTACAAAG TTATTACATT
CCGGCCATCG CCGCAGAAAA TAACGATGAT GAAAAAGAAT GTCCCAGTAA TATCTCCTCC
CTGCCTAAAG AAAAACGCGC AAAACTTTCA CCGACCTGCC TTGCTACACC TGAAAATGAT
AATCACTGGG GCTGGGTTGC TGGCGGCGTT GCTGCACTGG TCGCAGGTGT GGCTATTGGC
GTTGAAAATA ACGGTGGCGG AGATTCTAAT CATTCTTATA CCCCCCCTAA GCCCGATAAT
GGCGGCGACG TCACCCCGCC CGACGATGGC GGCAACGTCA CCCCGCCCGA CGATGGCGGC
GATGACAATG TGACCCCGCC CGACGATAGT GGCGATGACG ATGTGGCCCC GCCTGACGAT
AGCGGCGATG ACGATGTAAC CCCGCCCGAC GATAGCGGCG ATGACGATGT GACCCCGCCC
GATGATAGCG GCGATGACGA TGTAACCCCG CCCGACGATA GCGGCGATGA CGATGTAACC
CCGCCCGATG ATAGCGGCGA TGACGATGTA ACCCCGCCCG ACGATAGCGG CGATGACGAT
GTAACCCCGC CCGATGATAG CGGCGATGAC GATGTAACCC CGCCTGACGA TAGCGGCGAT
GACGATGTGA CCCCGCCCGA CGATAGCGGC GACGACGACG ACACGCCCCC GGATGACTCT
GTTATAACCT TCAGCAACGG CGTCACCATC GATAAAGGCA AAGACACCCT GACCTTCGAT
AGCTTCAAAC TGGATAACGG CAGCGTTCTC GAGGGTGCCG TGTGGAATTA TTCAGAACAG
GACAACCAGT GGCAGCTCAC CACCGCGGAC GGCAAAACGC TGAACGTCAC CGGCTGGGAC
GTGACCGACG CCAATGCCGC CGTGATTGAA GGCACCCAGG AAAACGGTCT CTACTGGAAG
TACGACAGCC GGGGCTATCT GATTATTGCC GACGATAACA CCACCGTTAT CAGCGGCGAT
GACCAGGCGC ATAATTCCGA TCGCGGCATG GATATCAGCG GCCAGGATCG CACCGGCGTG
ATTATTTCCG GCGATAGAAC CGTCAACACG CTCACCGGGG ACTCCAGTGT GACCGACGGT
GCCACCGGCA TGGTTATCTC CGGTGACGGC ACCACCAACA CCATTTCGGG CCACTCCACG
GTGGACAACG CCACCGGCGC GCTGATTTCC GGCAACGGCA CCACCACCAA TTTCGCCGGT
GACATTGCCG TGAGCGGCGG CGGTACCGCC ATCATCATCG ACGGCGACAA CGCCACGATT
AAGAATACCG GTACCTCTAA CATCAGCGGC GCAGGCTCCA CCGGCACCGT CATTGACGGC
AATAACGCCC GCGTCAACAA TGACGGTGAT ATGACCATCA CCGACGGCGG CACCGGCGGC
CACATTACCG GCGATAACGT GGTTATCGAT AACGCCGGGA GCACTACCGT CAGCGGCGCG
GACTCCACGG CGCTGTATAT CGATGGCGAC AACGCGCTCG TTATCAACGA AGGTAATCAA
ACTATCTCTG GCGGCGCCGT CGGTACGCGC ATTGACGGCG ACGACGCCCA TACCACCAAT
ACCGGTGATA TCGCGGTGGA TGGCGCGGGC TCTGCCGCCG TGATTATCAA CGGCGACAAC
GGCAGCCTGA CCCAGGCGGG CGATCTGCTG GTCACCGACG GCGCGATGGG CATCATCACC
TACGGCACCG GAAATGAAGC AAAAAATACC GGCAACGCCA CCGTGCGTGA TGCGGACTCG
GTGGGTTTTG TGGTTGCAGG CGAAAAAAAC ACCTTCAAAA ACAAAGGGGA TATTGACGTC
AGCCTTAACG GCACCGGCGC GCTGGTGAGC GGCGATATGT CGCAGGTTAC GCTGGATGGC
GATATTAACG TTGTCTCAGT CCAGGACAGC GAAGGCGTGT TTAGCTCAGC GACAGGGGTG
AGCGTGAGCG GCGACAGCAA CGCCGTTGAT ATCACCGGCA ACGTAAATAT CAGCGCCGAC
TACGGGCAGG ATGATCTGGC TGCCGGGGCT CCCCCGTTAA CCGGCGTTGT CGTCGGCGGT
AACGGCAATA CCGTTACCCT TAATGGCGCG CTGAATATTG ATGACAACGA TCTGTCCGCC
ACCAGCGGAC AATACCTGGA CGTTGTTGGC CTGAGCGTAA CAGGTGATGA TAACGACGTT
GAGATTGGCG GCGGTATTAA TATCACCCAC AGCGAGGATC CACTTGATGG AACCTCTGCA
GACATTACCG GCATCAGCGT CAGCGGTAAC AGTACCGTTA CGCTAAACGG TCATTCTACC
ATTGATACCA ACACGGTAGT GGGGGGTCAC GTTGTACTGG CGCGGGTCAA CAACGGCGGC
TCCCTGATTC TGGGTGATGA CTCAGTTGTT GACGTTAATG TCAGTTATAT ACCCACAGGC
TATTACACCT ACAACGCGTT GCTGATGGCT GATGGCGAAG GCACATCAAT TGAAAATAAA
GGCGATATTA CAAGCCATGG CGTGTATTCC GTCATTCGCG CAGATAACGG CTCGGAAGTC
AGCAACAGCG GAGATATTCT GGTCTACGCG ACCAGTAGCA ACAGTAGTGA GGATCGTGCA
GCCATCACAA GGGCTAGTGG CGAGGGATCG GCTGTTCATA ACAAAGCCAG CGGCGATATC
ACCCTCATTT CTGATCAAAC GCCGCAGGGC AGTGGCGGTA TTGAAGTATA CCCATTGAAA
TGGTACACCC ACACCTTTTA CGCCATGATG GCTTCGGATT ATGGCGATGT CGTTAACGAT
GAGGGCGCCA CGATCCATTT GCAGGGGGCA GGTGTATATG GCGTTACCGC CAGCCGAGGT
AAAGCACTAA ACGAAGGCGA TATCTATCTG GATGGCCTTG TCCCGACGCT GGACGATGAA
AATAACATCA CCAGCACCAG CTACTGGCAG CCATCATCGC TCTATCTCAC CAGCTCAGGA
ATGGTGGCGG GTTCCACCGA TGCCGATGGC GACGCCACCG CCATCAACAC CGGCAACATT
ACCGTCAACA ACGCCGGGTT CGGCATGATG GCGCTTAATG GCGGCACCGC CATTAACCAG
GGCGTGATCA CCCTGACCGC CGATGACGGC GTGACCGGTC AGGCAGACGA GCTGGTCGGG
ATGGCGGCGC TCAACGGCGG CGTCGTCATC AACGACACCA GCGGCGTGAT TAACATCGAC
GCCGATTACG GCCAGGCGTT TCTGAGCGAC AGCTCCAGCT ATATCATCAA TAACGGCTCC
ATCAACCTTA ACGGCAGCCC GATGGATGAT ACTGACTCCC ATATGGGCGG CACGCCAACG
GACAAAATCT GGATTCAGTC CCTGCCCGGC AGCGGCGACA GCGACACCAG GACCTCCGAC
ACAGGTTTCT TCACCGCCGG TACGCTGGCC AACTACGGTA CTGAAACCCT GAACGGCGAT
GTGGACGTTA ACGGGGGCTG GCTGTACAAC GAAGCGGGCG CCTCGCTCAC CGTCAACGGC
ACCGTGACGA TTAACGGCGG GGCTAACGCG CTGGCTAACT ACGGGACGCT GGACGCGGAC
GCTATTTCCA CCTGGCACAG CCTCTTTAAT GAAGCGGACG GCAGCATCAC CACCGATCTG
TTAACCCTTA ATGGCGACGT CACTTTTTAC AATAACGGCG ATTTCACCGG CTCCATAGCG
GGCACCAGCT ACCAGCAGGA AATCGTCAAT ACTGGCGATA TGACGGTGGC GGAAGATGGC
AAATCGCTGG TCAGCGGCAG CTTCTATTTC TATAACGAAG AGGACGCAAC GCTTACCAAC
AGCGGCAGCG CGGTGGAAGG CGGTGAGAAC ACCATCATCA ATCTGACGCG CGCCAACGAT
TCGCTGACCC AGGTGAACAG CGGCACCATC ACCGCCACTA ACGGTTACAG CGCCATCACC
ACGGTCAACG GCAGCAATGA CCCCAAATGG ATCTGGAACA CCGCAACCGG CGTGATTAAC
GGTATTAACC CGGATGCGCC GCTAATCAAT TTGGGCCGCG GCTATAACTT CGGCAACCAG
GGCACTATCA ACGTGCAGGG CGATAACGCC GTGGCGATTA GCGGCGGCAC CAGCAGTTAT
GTCATTAACC TGGTCAATAG CGGCACCATC AACGTCGGTA CCGAGCAGGG CAAGGAGGAC
GGCACCAATG GCACCGGGCT TATCGGCATC AAGGGCAACG GTAATGCCAC CACCATAAAC
AACACCGCAG ACGGCGTGAT CAACGTTTAC GCGGATGACT CGTATGCGTT TGGCGGCAAG
ACCAAAGCCA TCATCAACAA CGGCGAAATC AACCTGCTGT GCGACAGCGG CTGCGACATC
TACGCGCCGG GTACTACGGG TACGCAGAAC GACCATAACG GGACAGCGGA CATCGTCATT
CCGGATGCGA CTACCGCCCC GACCGAGGGC AGCATCCCGA CGCCGCCAGC GGATCCCAAC
GCGCCGCAGC AGCTCTCCAA CTATATTGTT GGCACCAACG CCGACGGTAG TTCCGGTACG
CTGAAAGCCA ATAACCTGGT GATTGGCGAC AACGTGAAGG TGGATACCGG CTTTACCAGC
GGTACGGCGG ATACCACCGT GGTGGTGGAT AACGCCTTCA CCGGCAGCAA TATCCAGGGC
GCGGACAACA TCACTTCCAC CAGCGTGGTG TGGAACGCCC AGGGTAGCCA GGATGCCGAC
GGCAACGTTG ACGTCACCAT GACCAAAAAC GCCTATGCCG ATGTGGCGAC CGACAGCTCG
GTAAGCGACG TGGCGCAGGC GCTGGACGCC GGTTACACCA ACAACGAGCT GTACACCAGC
CTTAATGTGG GGACTACCGC CGAGCTGAAC AGCGCACTCA AGCAGGTGAG CGGTGCTCAA
GCCACCACGG TATTCCGTGA AGCGCGTGTA CTCAGCAACC GCTTTACCAT GCTGGCCGAC
GCCGCGCCGC AAATTAAAGA TGGTCTGGCG TTCAACGTGG TGGCGAAAGG CGACCCACGT
GCGGAGCTGG GCAACGACAC CCAGTACGAC ATGCTGGCAT TACGCCAGAC GTTGGATCTC
ACCGCCAGCC AGAATCTGAC GCTGGAGTAC GGTATTGCGC GTCTGGATGG CGACGGCTCG
AAAACTGCGG GCGATAACGG CCTGACAGGC GGCTACAGCC AGTTCTTTGG CCTGAAGCAC
AGCATGGCGT TTGATGAAGG TCTGGCGTGG AACAACAGCC TGCGTTATGA CGTGCACAAC
CTCGACAGCA GCCGTTCTGT CGCTTATGGC GATGTCAACA AAATTGCCGA TTCCGACATG
CGTCAGCAGT ACCTTGAGTT TCGCAGTGAA GGGGCGAAAA CTTTCACCAT GATGAGTGAT
ACGCTGAAAG TCACGCCGTA TGCCGGGGTG AAATTCCGTC ACACCATGGA AGGAGGCTAC
AAAGAGCGCA GCGCCGGAGA TTTTAACCTG TCCATGAACT CTGGCAACGA AACGGCGGTA
GACTCTATTG TCGGCCTGAA GCTGGATTAC GCCGGGAAAG ACGGCTGGAG CGCCACCGCT
ACCCTGGAAG GCGGCCCGAA CCTGAGCTAC AGCAAGAGCC AGCGTACAGC GTCATTACAG
GGTGCGGCGG GTCAATCGTT CGGCGTGGAT GACGGTCAAA AAGGCGGCGG CATTAATGGC
CTGGCAACCA TCGGCGTGAA ATATAGCAGC AATGATACCG CGCTACATCT GGATGCATAC
CAGTGGAAGG AAGACAGTAT CAGCGATAAA GGCTTTATGC TTAACGTTAA GAAAACATTT
CGTTAA
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| Protein sequence | MQKKKLISIA IALTLQSYYI PAIAAENNDD EKECPSNISS LPKEKRAKLS PTCLATPEND
NHWGWVAGGV AALVAGVAIG VENNGGGDSN HSYTPPKPDN GGDVTPPDDG GNVTPPDDGG
DDNVTPPDDS GDDDVAPPDD SGDDDVTPPD DSGDDDVTPP DDSGDDDVTP PDDSGDDDVT
PPDDSGDDDV TPPDDSGDDD VTPPDDSGDD DVTPPDDSGD DDVTPPDDSG DDDDTPPDDS
VITFSNGVTI DKGKDTLTFD SFKLDNGSVL EGAVWNYSEQ DNQWQLTTAD GKTLNVTGWD
VTDANAAVIE GTQENGLYWK YDSRGYLIIA DDNTTVISGD DQAHNSDRGM DISGQDRTGV
IISGDRTVNT LTGDSSVTDG ATGMVISGDG TTNTISGHST VDNATGALIS GNGTTTNFAG
DIAVSGGGTA IIIDGDNATI KNTGTSNISG AGSTGTVIDG NNARVNNDGD MTITDGGTGG
HITGDNVVID NAGSTTVSGA DSTALYIDGD NALVINEGNQ TISGGAVGTR IDGDDAHTTN
TGDIAVDGAG SAAVIINGDN GSLTQAGDLL VTDGAMGIIT YGTGNEAKNT GNATVRDADS
VGFVVAGEKN TFKNKGDIDV SLNGTGALVS GDMSQVTLDG DINVVSVQDS EGVFSSATGV
SVSGDSNAVD ITGNVNISAD YGQDDLAAGA PPLTGVVVGG NGNTVTLNGA LNIDDNDLSA
TSGQYLDVVG LSVTGDDNDV EIGGGINITH SEDPLDGTSA DITGISVSGN STVTLNGHST
IDTNTVVGGH VVLARVNNGG SLILGDDSVV DVNVSYIPTG YYTYNALLMA DGEGTSIENK
GDITSHGVYS VIRADNGSEV SNSGDILVYA TSSNSSEDRA AITRASGEGS AVHNKASGDI
TLISDQTPQG SGGIEVYPLK WYTHTFYAMM ASDYGDVVND EGATIHLQGA GVYGVTASRG
KALNEGDIYL DGLVPTLDDE NNITSTSYWQ PSSLYLTSSG MVAGSTDADG DATAINTGNI
TVNNAGFGMM ALNGGTAINQ GVITLTADDG VTGQADELVG MAALNGGVVI NDTSGVINID
ADYGQAFLSD SSSYIINNGS INLNGSPMDD TDSHMGGTPT DKIWIQSLPG SGDSDTRTSD
TGFFTAGTLA NYGTETLNGD VDVNGGWLYN EAGASLTVNG TVTINGGANA LANYGTLDAD
AISTWHSLFN EADGSITTDL LTLNGDVTFY NNGDFTGSIA GTSYQQEIVN TGDMTVAEDG
KSLVSGSFYF YNEEDATLTN SGSAVEGGEN TIINLTRAND SLTQVNSGTI TATNGYSAIT
TVNGSNDPKW IWNTATGVIN GINPDAPLIN LGRGYNFGNQ GTINVQGDNA VAISGGTSSY
VINLVNSGTI NVGTEQGKED GTNGTGLIGI KGNGNATTIN NTADGVINVY ADDSYAFGGK
TKAIINNGEI NLLCDSGCDI YAPGTTGTQN DHNGTADIVI PDATTAPTEG SIPTPPADPN
APQQLSNYIV GTNADGSSGT LKANNLVIGD NVKVDTGFTS GTADTTVVVD NAFTGSNIQG
ADNITSTSVV WNAQGSQDAD GNVDVTMTKN AYADVATDSS VSDVAQALDA GYTNNELYTS
LNVGTTAELN SALKQVSGAQ ATTVFREARV LSNRFTMLAD AAPQIKDGLA FNVVAKGDPR
AELGNDTQYD MLALRQTLDL TASQNLTLEY GIARLDGDGS KTAGDNGLTG GYSQFFGLKH
SMAFDEGLAW NNSLRYDVHN LDSSRSVAYG DVNKIADSDM RQQYLEFRSE GAKTFTMMSD
TLKVTPYAGV KFRHTMEGGY KERSAGDFNL SMNSGNETAV DSIVGLKLDY AGKDGWSATA
TLEGGPNLSY SKSQRTASLQ GAAGQSFGVD DGQKGGGING LATIGVKYSS NDTALHLDAY
QWKEDSISDK GFMLNVKKTF R
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