Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3668 |
Symbol | cafA |
ID | 6491001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3554259 |
End bp | 3555728 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642743786 |
Product | ribonuclease G |
Protein accession | YP_002047398 |
Protein GI | 194449343 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 0.612174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCTG AATTGTTGGT AAACGTAACG CCATCGGAAA CGCGCGTGGC GTACATTGAT GGCGGTATTC TTCAGGAAAT CCATATTGAG CGCGAAGCGC GACGCGGAAT CGTAGGCAAT ATCTACAAAG GTCGTGTAAG TCGTGTACTT CCAGGTATGC AGGCGGCTTT TGTAGATATT GGGCTGGATA AAGCCGCATT TCTTCACGCT TCCGACATTA TGCCGCATAC CGAATGCGTG GCGGGCGACG AGCAAAAACA GTTTACCGTG CGCGATATCT CCGAACTGGT GCGTCAGGGA CAGGATCTGA TGGTGCAGGT AGTGAAAGAT CCGCTCGGCA CGAAAGGCGC GCGTTTGACC ACGGACATCA CGTTGCCCTC CCGTTACCTT GTTTTTATGC CCGGCGCGTC ACACGTTGGC GTTTCCCAGC GTATCGAAAG CGAAAGTGAA CGCGAGCGCC TGAAAAAGGT GGTGGCGGAA TACTGCGACG AACAGGGCGG GTTTATTATC CGCACCGCGG CGGAAGGCGT GTGTGAAGAG GATCTCGCGT CTGACGCCGC CTATCTCAAG CGCGTCTGGA CGAAAGTCAT GGAGCGCAAA AAGCGTCCGC AAACGCGCTA CCAGATGTAT GGCGAACTGG CGCTGGCGCA GCGCGTGCTG CGCGATTTCG CCGATGCGCA GTTGGACCGA ATTCGCGTTG ACTCACGTCT GACCTATGAG TCGCTGCTGG AGTTTACCGC AGAATACATC CCGGAAATGA CCAGTAAGCT GGAGCATTAC AGTGGCCATC AGCCGATCTT CGATCTTTAT GACGTGGAAA ATGAGATCCA GCGCGCACTG GAGCGTAAGG TTGAACTCAA GTCCGGCGGT TATCTGATTA TCGACCAAAC CGAAGCGATG ACGACGGTAG ATATCAATAC CGGCGCGTTT GTCGGACACC GTAATCTCGA CGACACCATT TTTAATACCA ATATTGAAGC GACTCAGGCC ATTGCCCGCC AGCTACGCCT GCGTAATCTG GGCGGCATTA TCATTATCGA TTTTATCGAC ATGAATAATG AAGATCATCG CCGCCGGGTG CTGCATTCGC TGGAACAGGC GTTAAGTAAG GATCGCGTGA AAACCAGTAT TAACGGTTTT TCGCCGCTGG GACTGGTGGA AATGACCCGT AAACGGACTC GTGAAAGCGT GGAACATGTG CTTTGTAACG AGTGTCCAAC CTGTCATGGC CGCGGGACGG TAAAAACGGT GGAAACCGTC TGCTATGAGA TCATGCGTGA AATTGTACGT GTTCATCACG CTTATGACTC CGATCGCTTC CTGGTTTATG CTTCTCCTGC GGTGGCGGAA GCGCTGAAAG GCGAAGAATC ACACGCGCTG GCGGAAGTCG AAATCTTTGT CGGCAAACAG GTTAAAGTTC AGGTCGAACC GCTTTATAAC CAGGAGCAGT TTGACGTCGT AATGATGTAA
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Protein sequence | MTAELLVNVT PSETRVAYID GGILQEIHIE REARRGIVGN IYKGRVSRVL PGMQAAFVDI GLDKAAFLHA SDIMPHTECV AGDEQKQFTV RDISELVRQG QDLMVQVVKD PLGTKGARLT TDITLPSRYL VFMPGASHVG VSQRIESESE RERLKKVVAE YCDEQGGFII RTAAEGVCEE DLASDAAYLK RVWTKVMERK KRPQTRYQMY GELALAQRVL RDFADAQLDR IRVDSRLTYE SLLEFTAEYI PEMTSKLEHY SGHQPIFDLY DVENEIQRAL ERKVELKSGG YLIIDQTEAM TTVDINTGAF VGHRNLDDTI FNTNIEATQA IARQLRLRNL GGIIIIDFID MNNEDHRRRV LHSLEQALSK DRVKTSINGF SPLGLVEMTR KRTRESVEHV LCNECPTCHG RGTVKTVETV CYEIMREIVR VHHAYDSDRF LVYASPAVAE ALKGEESHAL AEVEIFVGKQ VKVQVEPLYN QEQFDVVMM
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