Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3615 |
Symbol | lptA |
ID | 6490999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 3498391 |
End bp | 3498945 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642743735 |
Product | lipopolysaccharide transport periplasmic protein LptA |
Protein accession | YP_002047347 |
Protein GI | 194450949 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.190854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA AAACAAACAA ACTCAGCCTT AATCTTATGC TTGCCGGCTC GCTGCTGGCC GCCAGCATTC CGGCTTTCGC CGTCACGGGC GATACCGAAC AGCCTATTCA TATTGACTCG GATCAACAGT CGCTGGATAT GCAAGGCAAC GTCGTGACCT TTACGGGCAA CGTGGTGATG ACCCAGGGCA CGATTAAGAT CAACGCCGAT AAAGTCGTGG TTACCCGCCC TGGCGGCGAA CAGGGGAAAG AGGTGATCGA CGGTTACGGC AATCCGGCCA CCTTCTACCA GATGCAGGAC AACGGTAAGC CGGTGAAAGG CCACGCTTCC CATATGCATT ACGAGCTGGC GAAAGATTTT GTGGTGCTGA CCGGCAACGC TTATCTGGAG CAGCTTGACA GCAACATTAC CGGCGACAAA ATCACCTACC TGGTGAAAGA GCAGAAAATG CAGGCCTTCA GCGAGAAAGG CAAACGCGTC ACCACCGTTC TGGTGCCGTC GCAGTTGCAA GACAAAAACA AAGGCCAGAC TCCGGCGCAA AAGAAGAGTA ACTAA
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Protein sequence | MKFKTNKLSL NLMLAGSLLA ASIPAFAVTG DTEQPIHIDS DQQSLDMQGN VVTFTGNVVM TQGTIKINAD KVVVTRPGGE QGKEVIDGYG NPATFYQMQD NGKPVKGHAS HMHYELAKDF VVLTGNAYLE QLDSNITGDK ITYLVKEQKM QAFSEKGKRV TTVLVPSQLQ DKNKGQTPAQ KKSN
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